Genomic Location: chr4:57823101...57823634
NR annotation: XP_011406639.1, PREDICTED: tigger transposable element-derived protein 4-like [Amphimedon queenslandica]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene17160.t1 |
| Transcript |
| gene17160.t1 |
| Protein |
| gene17160.t1 |
| UniProt accession | Description |
|---|---|
| Q6NT04 | Tigger transposable element-derived protein 7 OS=Homo sapiens OX=9606 GN=TIGD7 PE=1 SV=1 |
| Q0VBL1 | Tigger transposable element-derived protein 2 OS=Mus musculus OX=10090 GN=Tigd2 PE=2 SV=1 |
| Q4W5G0 | Tigger transposable element-derived protein 2 OS=Homo sapiens OX=9606 GN=TIGD2 PE=1 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000106 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF03221 all species → | HTH_Tnp_Tc5 | Tc5 transposase DNA-binding domain | Domain | Interproscan |
| PF04218 all species → | CENP-B_N | CENP-B N-terminal DNA-binding domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006600 all species → | Domain | HTH CenpB-type DNA-binding domain | Interproscan |
| IPR050863 all species → | Family | Centromere and Transposable Element-Derived Protein | Interproscan |
| IPR007889 all species → | Domain | DNA binding HTH domain, Psq-type | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR19303 all species → | TRANSPOSON | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0005634 all species → | Cellular Component | nucleus | Interproscan |
gene17160.t1.
