Detailed information of gene17200.t1 in Actinoscyphia liui

Genomic Location: chr4:58577090...58611901
NR annotation: XP_020898535.1, hemicentin-1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8NDA2Hemicentin-2 OS=Homo sapiens OX=9606 GN=HMCN2 PE=1 SV=4
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
A1KZ92Probable oxidoreductase PXDNL OS=Homo sapiens OX=9606 GN=PXDNL PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF13895Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46958B-CELL RECEPTOR CD22Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005769Cellular Componentearly endosomeInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0019903Molecular Functionprotein phosphatase bindingInterproscan
GO:0030888Biological Processregulation of B cell proliferationInterproscan
GO:0033691Molecular Functionsialic acid bindingInterproscan
GO:0042113Biological ProcessB cell activationInterproscan
GO:0042609Molecular FunctionCD4 receptor bindingInterproscan
GO:0050859Biological Processnegative regulation of B cell receptor signaling pathwayInterproscan
GO:0055037Cellular Componentrecycling endosomeInterproscan
GO:0070062Cellular Componentextracellular exosomeInterproscan

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