Detailed information of gene17205.t2 in Actinoscyphia liui

Genomic Location: chr4:58717248...58727429
NR annotation: XP_020898537.1, hemicentin-1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P40199Cell adhesion molecule CEACAM6 OS=Homo sapiens OX=9606 GN=CEACAM6 PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0015072 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927
all species →		Ig_3Immunoglobulin domainDomainInterproscan
PF01390
all species →		SEASEA domainFamilyInterproscan
PF13895
all species →		Ig_2Immunoglobulin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003598
all species →		DomainImmunoglobulin subtype 2Interproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000082
all species →		DomainSEA domainInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR051275
all species →		FamilyCellular adhesion and signaling domain-containing proteinInterproscan
IPR036364
all species →		Homologous_superfamilySEA domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11640
all species →		NEPHRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0005911
all species →		Cellular Componentcell-cell junctionInterproscan
GO:0050839
all species →		Molecular Functioncell adhesion molecule bindingInterproscan
GO:0098609
all species →		Biological Processcell-cell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene17205.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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