Detailed information of gene17705.t1 in Actinoscyphia liui

Genomic Location: chr5:3401032...3404326
NR annotation: XP_020891960.1, 72 kDa type IV collagenase [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O18927Collagenase 3 OS=Equus caballus OX=9796 GN=MMP13 PE=2 SV=1
O55123Stromelysin-2 OS=Mus musculus OX=10090 GN=Mmp10 PE=2 SV=1
O62806Collagenase 3 OS=Oryctolagus cuniculus OX=9986 GN=MMP13 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00045HemopexinHemopexinRepeatInterproscan
PF00413Peptidase_M10MatrixinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018487RepeatHemopexin-like repeatsInterproscan
IPR021190FamilyPeptidase M10AInterproscan
IPR036375Homologous_superfamilyHemopexin-like domain superfamilyInterproscan
IPR036365Homologous_superfamilyPGBD-like superfamilyInterproscan
IPR006026DomainPeptidase, metallopeptidaseInterproscan
IPR024079Homologous_superfamilyMetallopeptidase, catalytic domain superfamilyInterproscan
IPR033739DomainPeptidase M10A, catalytic domainInterproscan
IPR000585DomainHemopexin-like domainInterproscan
IPR001818DomainPeptidase M10, metallopeptidaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10201MATRIX METALLOPROTEINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004222Molecular Functionmetalloendopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0030198Biological Processextracellular matrix organizationInterproscan
GO:0030574Biological Processcollagen catabolic processInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan

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