Genomic Location: chr5:5779676...5780059
NR annotation: RXN33948.1, Retrotransposable element Tf2 type 1 [Labeo rohita]
| CDS | ||||
| gene17832.t1 | ||||
| Transcript |
| gene17832.t1 |
| Protein |
| gene17832.t1 |
| Uniprot term | Description |
|---|---|
| P12894 | Intracisternal A-particle Pol-related polyprotein (Fragment) OS=Mouse intracisternal a-particle IL3 OX=11754 PE=3 SV=1 |
| P11368 | Intracisternal A-particle Pol-related polyprotein (Fragment) OS=Mouse intracisternal a-particle MIA14 OX=11753 GN=pol PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00665 | rve | Integrase core domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR050951 | Family | Retrovirus-related Pol polyprotein | Interproscan |
| IPR001584 | Domain | Integrase, catalytic core | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR37984 | PROTEIN CBG26694 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0015074 | Biological Process | DNA integration | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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