Detailed information of gene18412.t1 in Actinoscyphia liui

Genomic Location: chr5:17891985...17894516
NR annotation: KXJ14231.1, 120.7 kDa protein in NOF-FB transposable element [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q70EL3Ubiquitin carboxyl-terminal hydrolase 50 OS=Homo sapiens OX=9606 GN=USP50 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000547 (this species only)
Ubiquitin familyDUB|ULP|ULP · all ubiquitin genes in this species
Ubiquitin familyDUB|USP|USP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02902
all species →		Peptidase_C48Ulp1 protease family, C-terminal catalytic domainDomainInterproscan
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003653
all species →		DomainUlp1 protease family, C-terminal catalytic domainInterproscan
IPR050164
all species →		FamilyUbiquitin carboxyl-terminal hydrolasesInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24006
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006508
all species →		Biological ProcessproteolysisInterproscan
GO:0008234
all species →		Molecular Functioncysteine-type peptidase activityInterproscan
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene18412.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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