Detailed information of gene18527.t1 in Actinoscyphia liui

Genomic Location: chr5:20162374...20180167
NR annotation: KXJ28204.1, VPS10 domain-containing receptor SorCS2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q6PHU5Sortilin OS=Mus musculus OX=10090 GN=Sort1 PE=1 SV=1
O54861Sortilin OS=Rattus norvegicus OX=10116 GN=Sort1 PE=1 SV=3
Q99523Sortilin OS=Homo sapiens OX=9606 GN=SORT1 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15901Sortilin_CSortilin, neurotensin receptor 3, C-terminalDomainInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan
PF00801PKDPKD domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR022409DomainPKD/Chitinase domainInterproscan
IPR006581DomainVPS10Interproscan
IPR031777DomainSortilin, C-terminalInterproscan
IPR031778DomainSortilin, N-terminalInterproscan
IPR000601DomainPKD domainInterproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan

TOP