Genomic Location: chr5:23217787...23223363
NR annotation: XP_032220546.2, SCO-spondin isoform X1 [Nematostella vectensis]
| CDS | ||||
| gene18738.t1 | ||||
| Transcript |
| gene18738.t1 |
| Protein |
| gene18738.t1 |
| Uniprot term | Description |
|---|---|
| B3EWZ3 | Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1 |
| Q96RW7 | Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2 |
| A2VEC9 | SCO-spondin OS=Homo sapiens OX=9606 GN=SSPOP PE=2 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00089 | Trypsin | Trypsin | Domain | Interproscan |
| PF13306 | LRR_5 | BspA type Leucine rich repeat region (6 copies) | Repeat | Interproscan |
| PF13855 | LRR_8 | Leucine rich repeat | Repeat | Interproscan |
| PF00090 | TSP_1 | Thrombospondin type 1 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000884 | Repeat | Thrombospondin type-1 (TSP1) repeat | Interproscan |
| IPR036383 | Homologous_superfamily | Thrombospondin type-1 (TSP1) repeat superfamily | Interproscan |
| IPR001254 | Domain | Serine proteases, trypsin domain | Interproscan |
| IPR001314 | Family | Peptidase S1A, chymotrypsin family | Interproscan |
| IPR018114 | Active_site | Serine proteases, trypsin family, histidine active site | Interproscan |
| IPR000436 | Domain | Sushi/SCR/CCP domain | Interproscan |
| IPR026906 | Repeat | BspA-type LRR region | Interproscan |
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR043504 | Homologous_superfamily | Peptidase S1, PA clan, chymotrypsin-like fold | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR035976 | Homologous_superfamily | Sushi/SCR/CCP superfamily | Interproscan |
| IPR009003 | Homologous_superfamily | Peptidase S1, PA clan | Interproscan |
| IPR000483 | Domain | Cysteine-rich flanking region, C-terminal | Interproscan |
| IPR052065 | Family | Complement and asymmetry regulator | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22906 | PROPERDIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004252 | Molecular Function | serine-type endopeptidase activity | Interproscan |
| GO:0006508 | Biological Process | proteolysis | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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