Gene detail

Detailed information of gene18911.t1 in Actinoscyphia liui

Genomic Location: chr5:25351418...25373120
NR annotation: XP_020908973.1, adhesion G protein-coupled receptor A3 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene18911.t1

ATGTTTGCGAGAGGAGCGTTGTTACTGTACATTTTGCTTCTAAGGATGACGATCGTGGTGTCTTGTCCGAGGGGTTGTTCTTGCCAAAAGCTAAAAGGCAGCCAGAAGCTTCGTGCCAGTTGTAATGGACTGAGTTTTAAGAAGATCATGGACCCCAATTCTCTCAAAAATGTCTCCTATCTAGATCTATCAAGCAACGAGATCACAACCATCCAAAGCAGAGCTTTTGGAGCGCATAAAACTCTCAAGAAACTTTATTTAACAAGGAATAAGATAACATCACTAAAGCAAGGAGCATTTATGGGATTATCTAAACTCAAAGAGCTAGATATCGCCCACAATGACTTACTAACGCTAAATGGAGAGCCATTTAAGGGTCTAAGAAGTCTAAGACGTCTTGATCTCAGTTACAACAATCTAAACTTCATTAATGGGACTGTTTTCCAAGGGCTAAGGAAACTCAGGGAGCTTCATGGCGATAATGATGATGATGATGATGATGATGGTAATGATGATGATGATGATGATGATGATGGTGGTGATGATGATAATGATGATGATGATGATGATAATGATGGTGATGATAATCATGATGATGATGATAATAATGATGATGATAATGATGATAATGATGATGATGATACTGATGATGGATATAAATTTATCATTATACCAGAGGCCACACTGAAGCCACTCCGTTCTCTATCTTCACTGAATCTGATATCCAATCGTATGTTATGTGACTGCCATGTGAAATGGCTTTTGACGAGCAAGAAGTTAAATAAAAAAGCGTTGAAAGGGACGTGTCGGTACCCAGAACCACTAAAGGACAAGAAATTAACACAGATCAGTGCGAAGAATCTACAATGTGCATCTTTACGGCTGCCTTATTACGAGTTTAAACCGAATAACGACGAGGTGGCCATTCAAGGAGACGGCTTCATGTTCACGTGTGGAACAACGTGGATTCCAGTCTTACGAATAAACTGGTTCAAAGACAACCATTTATTAAGACCCGATGTATTCAAACCTCACATCGTTATTGACTTCAAGGCTAACCTACAAGCTGGCCGTATCGTTAGTACTTTAAAGATAAAGAAACTCGACATCGGAGACACTGGGGTTTATAGATGTACAGTATCGAGTGACAAGATCTCTGTCAGCGGGGAATCATTGCTACAGGTACTGCCTGGCGGGTCTAAGTTTTGCCATTCAGAAGTGACCAAGACGGTGAAAGGAGTTTTCCACTGGGATAACATTGCTCTTGGAGGTGTCTCGCGTCTGCCTTGTCCCGCGGGAGTCCTACCAGGCATCGGGAAAGTTAAAGGATTTGCGTACCGTAATTGCGGTAAAGATGGCGTCTGGAGGGATGTGGAGGGCACCGAGTGCGCTTATGTGGATAAAGTCACTCAAGAGCTCTACCATCTAAAACAGCGCCCTGTGAACAGCACGACTGTGTTTGATATCTGCAATTCTCTGTACACACTCACCGAAAACGCTACAAGTATCAAGTCAGACATCGATGTGTCGTATGCAGCAAGCATCTTAGAGAGCGTCAAGGTCTTCTTGGGCGCTAATGAACAGGTCGGTAAAATTGTTGTGCATATTATCAGTAACATGATGAACGTGAGAGAAGACATTCTCGCAGAGGCGCAGATGAGGTCTAAAGCGTGTTCAAGCTTCATATTGGTTCTAGACGTATTGGCTAACGCCAATGTGGTAGGCACCAAATTCATATCCAGCAACGTAGGGATGAGCCTCGTTCCTGTCTATCCAGCGACCTTCCAAGGAAGTACATGCGCGTCTTATCTGGATAACAAATATCACCTGAATTCTGTTTCGTGTAACTTGGTGTGGAAGAATGTCACGACTTTTTCCCCGTCCAAACCGATCGAAGTATCTGTTCATCTACCCAAGTCGCTTTTTTCTGGCCAACGAATCCCGCCGATAACACAGCTCAAGCTAACGTTCACGGTGTTCAGGAACAGTAGGTTATTCCCACACCTTCGCAATGGTTCTCTGGTGGAGAACCCCAGAGTAGCAACCAGCGTCGTCAGCTTACGATTAGGAACGCAGCTTAATAACTTGTCAGAACCAATCGCAATCAAGTACCGCAATCAGCAGCAAAGCGATAAAACGCCGCCCATCTCTGTTTACTGGGATCAGACTCGTAAAGGAGGCATAGAATCGTGGGTGCAGAATAAGGACTGCACGCTAAGCAAGAGTGAGAACAGTACCATAATGTATTGTTATAAGTTAACTGACAAGAACTATTTTGCTGTCATAATGTCCGTGGAGAAAAGCATGTCAGCGTCTTCTAAGTCAGACCAAGTGCTCACGCTAAGTGTCGTGGTGTATGTCGGTGCTACACTGTGTACTGTGTTACTGCTGGTCACCTTGATCACTTATGCCGTGTTCAGAAAACTGCGCTACAACCGTGACGATGCAGCTATGTTAATGAACCTCTGCCTGGCACTGCTGGTAACCGTGATATTGTTCGTGGTTGGTATACATCGCGTGACCAACACGTTAATGTGCCGTGCAGTGGGCGTGTTGCTCCATTACTTTATACTGTGCTCACTACTATGGGTTGGCTGTGGAGCACTGTGTTTGTGCCGACTTCTACGCACAGCGGTTATCCCCGAGGAGTTCAACCCTGTGCTCAGATACTACATGATAAGTTGGGGAATTCCATTGATAATATGTGGAATAACTGTGGCCGGTAATCCAGATAACTACAGCGTACAAAAATATTGTTGGCTGGAGCCCAATCCTTTCCTAGGTGCCTTTGTTGGTCCGGCCTGCCTGGTGATACTCGTCGATATAATACTCTATATACGACTCAATAATCTCATCTACAATACTTACAATACTCTTGAAAACGGTGGCACTTCTGATGAAGATGAAGAAAACGTTGCTGTCGCCTCAGACGAACTGGCACCAGACCAAATCGCATCGAAGTGTGAACTTCTACAACGCTTACACGAAGTTTTGCCGGAGAAGAAAGACATCCTTGTTTATCAGAAAGGCAGTTTGTTGGTGATGCTGCTGATCGTGATCAACTTCGTTTTAGGGTTTCTCCTTGTGAAGTTTCAACAACCGAAGTCTTTGTACTTGTTACTCAGCTGTGCATACGCACTAGCGAATATTATGCTTGGAATAATCGTGTTTTTATTTCATTGCTTGAAGAACTCGAAAGCCAAGCAATTTTGGAAAGACTATTGTTCGAAGTGTTTGTTTAAGAAGAAATATCTTGTAGACCAAGAAATCGTTCCAAATACCGATTCCACAGAAGATAAAAGAAGCACATCGTTGTTGAATGGAGACACGGTCAGAGACAACGGAGTTCCTCTAAGTGCGGTTATTCCGCGTATTTACGGTGCACCTTCCACCCCGCTTGGCTCCGACATTCAGTCGAACGTCTCTTTGCCGTCTTCTGCTGTTTTGACTATTTCTGTAAACAATTTAATGAATCCTCCTAAACCTGGCGCCGTGGTGAATAATGCGCCGAATACACCTAACGCGGGTTCTCCACCAGGTTCGGTAACGACGTCAATGTCGGACAGGCAATCTTGTGTGTCAGCGCCTTTACCTTTAAGTCATGCACAACCCGAGGTCGCCATTCTTCCGCAGCGTTATAGTTACACCTTTGCAGATACCGAGAAGAAGAAGAAAAAGAAGAAAAAAACTAAAGTGAGCGCACCTTTGGCGTTGCCTGATAGAAATGCAATATCCAGTTCAATGGAATCGAACTTAAAGGCTAAATATGAAGGCCGACTTCATTTTCCCACCCGACCACCGGATCGTCCTGAAATTGCACCCGAGAAAGGAATCCAAGAAAGTGCACCCTCGGAGATGTCTTCGGTCAGAGAACCAAGTAGTTATTTAGAAACTCCTGTGCCCTACTCGTCGTGTGCTTCCTCTGATATATCTCTACCGACACCATGCTCATTCCAATCAAGACCCCCGATACCTGGGGCCCCAGATGTGAGGAATTTCGGACCGGGTACGGTAGGACAACCGGGTACTTTTTCAGCACCACATAATAATTACCCACGTCCGGTGTACGTCCCGGTAAACTTTGACCACCCGGGAGATCCATCAATGCGTTTAAGGAACTCTAACTATGCAAGTTACCCTAAAACAATTCCAGAGGAACGATATGTGTCTTTGCCTAAACGACCAAATGGCTTCATAGGACGCAAACCAAGTGACACGGAACATGTTTATGAATCGATTGATGAACCCCAACAAAATGGACAGCAATTTCCAACGCCAAATTTCGTTCCGCAGACCACCGCACCCGAACAAAATGGCACAAGTAAGCCACCTGAAAATGACAACACTGATACCGAAAACACTTCACTATTAGGCCCACCACAGGGCCCTCACTTAACTAATCAACCACCCAGCGACCAACATCTGCCTCGGAGAAAACCGAGAGAGCGAAGGAATCGCGATAAATCTAGAACTAGGCGATACAGAGACGGAGGGTCACATGGAAGACGCCGAGATCCTTCCTCTCGTTCCGGAGCTCCTCGGTCGTCTGCGACCTCGTTGAAGAGCGACCGAGTGAAGCCTGAACCCAAGGAATGGATCCCTGATCCGACTCCACAATGGGCGTATGTTCCTGTTCCGCATCTTACATCCAAGGAGGAGGATCGGAACGAAACAAGTGTATAA

Transcript

gene18911.t1

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
S4X0Q8	Adhesion G protein-coupled receptor A3 OS=Danio rerio OX=7955 GN=adgra3 PE=1 SV=1
Q7TT36	Adhesion G protein-coupled receptor A3 OS=Mus musculus OX=10090 GN=Adgra3 PE=2 SV=3
Q8IWK6	Adhesion G protein-coupled receptor A3 OS=Homo sapiens OX=9606 GN=ADGRA3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004770 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF02793 all species →	HRM	Hormone receptor domain	Family	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan
PF07679 all species →	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR051963 all species →	Family	Adhesion G protein-coupled receptor A	Interproscan
IPR036179 all species →	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR036445 all species →	Homologous_superfamily	GPCR family 2, extracellular hormone receptor domain superfamily	Interproscan
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR001879 all species →	Domain	GPCR, family 2, extracellular hormone receptor domain	Interproscan
IPR003599 all species →	Domain	Immunoglobulin subtype	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR007110 all species →	Domain	Immunoglobulin-like domain	Interproscan
IPR013098 all species →	Domain	Immunoglobulin I-set	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan
IPR046338 all species →	Homologous_superfamily	GAIN domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45930 all species →	G-PROTEIN COUPLED RECEPTOR 124-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K08462	ADGRA3, GPR125; adhesion G protein-coupled receptor A3	-	G protein-coupled receptors	ko04030	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.