Detailed information of gene18942.t1 in Actinoscyphia liui

Genomic Location: chr5:25684899...25686311
NR annotation: KXJ28675.1, Charged multivesicular body protein 4b [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5XGW6Charged multivesicular body protein 4b OS=Xenopus laevis OX=8355 GN=chmp4b PE=2 SV=1
Q6GL11Charged multivesicular body protein 4b OS=Xenopus tropicalis OX=8364 GN=chmp4b PE=2 SV=1
Q5ZHP5Charged multivesicular body protein 4b OS=Gallus gallus OX=9031 GN=CHMP4B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003038 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03357
all species →		Snf7Snf7FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005024
all species →		FamilySnf7 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22761
all species →		CHARGED MULTIVESICULAR BODY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007034
all species →		Biological Processvacuolar transportInterproscan
GO:0000815
all species →		Cellular ComponentESCRT III complexInterproscan
GO:0005771
all species →		Cellular Componentmultivesicular bodyInterproscan
GO:0006900
all species →		Biological Processvesicle budding from membraneInterproscan
GO:0009898
all species →		Cellular Componentcytoplasmic side of plasma membraneInterproscan
GO:0032511
all species →		Biological Processlate endosome to vacuole transport via multivesicular body sorting pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene18942.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP