Gene detail

Detailed information of gene19308.t4 in Actinoscyphia liui

Genomic Location: chr5:30602118...30609946
NR annotation: XP_031554099.1, uncharacterized protein LOC116291117 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene19308.t4

ATGAAAGAAATGTGTGGGAATTCGTTAATATTTCTAGTTCTTGGTCTTTGTTTACTTTCAAGCTGCAAAGAAATCCAAAGACATAAAGGAGCTGATCTGGGCGACGAAGATGATGAAGGAATAGAGATAAAAGTAGCCGAGCAGTTTGATTGGAAAACAGTTGAAATTCCGCCAGAAAAGTGCAAGGATAAGGCAAATAATTGTATAAGTTTTGCTAGAAACAAACAACGGTGTGACAAAGAATACGACATTGCAGTCAGACGGTGTCCTTTCAGCTGTGGACTTTGCAAAAAGAAAGCTTACCACACAAAGAACAAAGACAACACACATATCAAACATGAGACTCCCGATGTTCCATGGCAAAAGATTAAGATTGCACCCGAGAAATGTTTTGACCGGAAACATGACTGTCGTAAAGTCGCAAAGGAAGGCCAGTGTTTGGACCGGTTTAGTTACGTATTAAAGTACTGTCCATGGAGCTGTAGGTTCTGCAAACGATCATCAGAATACGACACTGATAAATGCATCGACCTTGCAAAAACGGATTGCCTACAATGGGAAAAAAATGGCGACTGTACTAATCTACCAGATTATATGACGCAGAATTGTAAGAAAGCATGCCAACTTTGTGGTCGAGAGAATGAATACACCGATAAAGACTGCCGCTGTCCCTTCTGGGCTCAAAATGGTTATTGCCCAATAAATCAACATATCAGTCAATTGTGCATGTACAGTTGTGCGAGGTATGCATATGTACCTTCTGCTGTGCAACCATATCCATATCCAATCACAGCATTGCATCCATACCAGCCAACACCAATACCAACTGCTCCACCGACCCAAAAAGCTGCACCAACTGCACCAACCACTCAAACAACACCAGCACCAGTAGAATCGACCGCTAAACCGACCGAAGAACCAAAAAACCCAGAAGAAACGACCGCTAAACCGACCGAAACAACTAAACCGACCGAGGAATCAACAGGGGAGCCTTCCGGGGAAACAGGAAATAACCAAAGTCCTACACAACCACAGAAACCCACTGAATCAAAACAACCAACTCAACCACAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAACAACGACAACAACAACAACCAAATCCCAATGAACAGCAAGCAGAACAGTCTGGCGAAGAAGATGAAGATTACGAGGAAAATGAGGATTCGACCGATAAAGAACGTAATCATGGGAAATATGTAGACCGCGAAGAATCTAGTATTGATTGGCAAAAAATAAACATTCCTCCCGAGGAATGCTTCGATAAAGAAGACGACTGTGAGCAGAATGCTGATGATGGCAATTGTTTGAAGGATTTCAAGTACTCACTGGAATCATGTCCATGGAGCTGTAGATTCTGTAAACGACCGAAAAAGTATGGTTGCAAAAAATGTAGAGACATATCAGGGCAAAGCTGTGCAGACTGGTCTAAACAAGGAGACTGTCTGAAACTGTCTGACTACATGATGCAAAACTGCAAACAATCGTGTGAATTATGTGGTGAAGAAAATGATTTGCAAGACTCAGACGTTCGATGTCCACATTGGGGTCGCAAAGGCTATTGTAAGATAGAATCGTACGTCAATACGAAGTGCCACTACAGTTGTCAAAAATATCGTGATGCTGAAGCAGCTCCTGAACCATATCCATGGCCAATACAATCACTACATCCATACCAGCCGACTCCTATTCCTTGGCCTATTCCGACGGCACCACCAGCTACCGCAACGGCACCAACAACATCTCCTCCGTCTTATCCATATCCACCCACGACACTACCACCGCCACCACCACCACCAACGTCTCGGCCTTATCCACCAACAAGCCCTTCGACATCACCTCCACCACCACCTGCGCCTTATCCAGCACCTCAACCTCTTCCACCAGCTCAACCGTCGTCTGAGTCGTCTACCGAAACACCTCCACCTCCGACACCACCGCCTCCTCCTCCTCCTCCTCAATCGTCGTCTGTATCCTCTTCCCAAACGCCCCCTCCTCCACCGCCGCCTCCTCCACCGCCGCCTCAATCGTCGTCTGTATCCTCTTCCCAAACGCCCCCTCCACCACCGCCCCCTCCTCCACCGCCGCCTCAATCGTCGTCTGTACCCTCTTCCGAAACATATCCTCCACCGCCACCACCTGCAGCACCAATATCTCAGCCTTCTTCACAAACAACGTCCGAAACATCTTCCGAAACATATCCTCCACCGCCGCCGCCGCCGCCGCCTCCACCAACAACTGAAGAACCTCAAGAACCGGCATCCGAATCCCCGCAACCAGCTTCGGCTCCTTCATCATCAAGTGAACCTTATCCAGCACCTTCAGAACAAGAATCCTCCCAACCAGCTGGACAATCTTCACCCACGTCACCACCTTCTCCATCATCGGATAACGAAGATGAAAAGAAACAAGAAGCTGAAAAGATACTGTCATCCACTGTGCTAGAAACGTCAGAACAAAAAGAAGATGCTGAAAACAATTCAAGTGGAAGTGCGAGTGGACGTGCGAGTGGAGACGTGGAATTTGAAGAAAGTGAGCCCGACGATGGACTAGGAGATAATGACATTGATGAGATGAGATTCAAAGCAAAGCAAACTCGGCGCCAAAAACAGCATAAAGATAAATCTCGTCACAAAACGTCTCACAGGCGTCATTAA

Transcript

gene19308.t4

TTCCTCAGTACACAAGCGGTGAAGGCACTGCAGCAATTCACATATGAAAGAAATGTGTGGGAATTCGTTAATATTTCTAGTTCTTGGTCTTTGTTTACTTTCAAGCTGCAAAGAAATCCAAAGACATAAAGGAGCTGATCTGGGCGACGAAGATGATGAAGGAATAGAGATAAAAGTAGCCGAGCAGTTTGATTGGAAAACAGTTGAAATTCCGCCAGAAAAGTGCAAGGATAAGGCAAATAATTGTATAAGTTTTGCTAGAAACAAACAACGGTGTGACAAAGAATACGACATTGCAGTCAGACGGTGTCCTTTCAGCTGTGGACTTTGCAAAAAGAAAGCTTACCACACAAAGAACAAAGACAACACACATATCAAACATGAGACTCCCGATGTTCCATGGCAAAAGATTAAGATTGCACCCGAGAAATGTTTTGACCGGAAACATGACTGTCGTAAAGTCGCAAAGGAAGGCCAGTGTTTGGACCGGTTTAGTTACGTATTAAAGTACTGTCCATGGAGCTGTAGGTTCTGCAAACGATCATCAGAATACGACACTGATAAATGCATCGACCTTGCAAAAACGGATTGCCTACAATGGGAAAAAAATGGCGACTGTACTAATCTACCAGATTATATGACGCAGAATTGTAAGAAAGCATGCCAACTTTGTGGTCGAGAGAATGAATACACCGATAAAGACTGCCGCTGTCCCTTCTGGGCTCAAAATGGTTATTGCCCAATAAATCAACATATCAGTCAATTGTGCATGTACAGTTGTGCGAGGTATGCATATGTACCTTCTGCTGTGCAACCATATCCATATCCAATCACAGCATTGCATCCATACCAGCCAACACCAATACCAACTGCTCCACCGACCCAAAAAGCTGCACCAACTGCACCAACCACTCAAACAACACCAGCACCAGTAGAATCGACCGCTAAACCGACCGAAGAACCAAAAAACCCAGAAGAAACGACCGCTAAACCGACCGAAACAACTAAACCGACCGAGGAATCAACAGGGGAGCCTTCCGGGGAAACAGGAAATAACCAAAGTCCTACACAACCACAGAAACCCACTGAATCAAAACAACCAACTCAACCACAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAAAACCAACAACCTGCAACAGAACCCAACCAACAACGACAACAACAACAACCAAATCCCAATGAACAGCAAGCAGAACAGTCTGGCGAAGAAGATGAAGATTACGAGGAAAATGAGGATTCGACCGATAAAGAACGTAATCATGGGAAATATGTAGACCGCGAAGAATCTAGTATTGATTGGCAAAAAATAAACATTCCTCCCGAGGAATGCTTCGATAAAGAAGACGACTGTGAGCAGAATGCTGATGATGGCAATTGTTTGAAGGATTTCAAGTACTCACTGGAATCATGTCCATGGAGCTGTAGATTCTGTAAACGACCGAAAAAGTATGGTTGCAAAAAATGTAGAGACATATCAGGGCAAAGCTGTGCAGACTGGTCTAAACAAGGAGACTGTCTGAAACTGTCTGACTACATGATGCAAAACTGCAAACAATCGTGTGAATTATGTGGTGAAGAAAATGATTTGCAAGACTCAGACGTTCGATGTCCACATTGGGGTCGCAAAGGCTATTGTAAGATAGAATCGTACGTCAATACGAAGTGCCACTACAGTTGTCAAAAATATCGTGATGCTGAAGCAGCTCCTGAACCATATCCATGGCCAATACAATCACTACATCCATACCAGCCGACTCCTATTCCTTGGCCTATTCCGACGGCACCACCAGCTACCGCAACGGCACCAACAACATCTCCTCCGTCTTATCCATATCCACCCACGACACTACCACCGCCACCACCACCACCAACGTCTCGGCCTTATCCACCAACAAGCCCTTCGACATCACCTCCACCACCACCTGCGCCTTATCCAGCACCTCAACCTCTTCCACCAGCTCAACCGTCGTCTGAGTCGTCTACCGAAACACCTCCACCTCCGACACCACCGCCTCCTCCTCCTCCTCCTCAATCGTCGTCTGTATCCTCTTCCCAAACGCCCCCTCCTCCACCGCCGCCTCCTCCACCGCCGCCTCAATCGTCGTCTGTATCCTCTTCCCAAACGCCCCCTCCACCACCGCCCCCTCCTCCACCGCCGCCTCAATCGTCGTCTGTACCCTCTTCCGAAACATATCCTCCACCGCCACCACCTGCAGCACCAATATCTCAGCCTTCTTCACAAACAACGTCCGAAACATCTTCCGAAACATATCCTCCACCGCCGCCGCCGCCGCCGCCTCCACCAACAACTGAAGAACCTCAAGAACCGGCATCCGAATCCCCGCAACCAGCTTCGGCTCCTTCATCATCAAGTGAACCTTATCCAGCACCTTCAGAACAAGAATCCTCCCAACCAGCTGGACAATCTTCACCCACGTCACCACCTTCTCCATCATCGGATAACGAAGATGAAAAGAAACAAGAAGCTGAAAAGATACTGTCATCCACTGTGCTAGAAACGTCAGAACAAAAAGAAGATGCTGAAAACAATTCAAGTGGAAGTGCGAGTGGACGTGCGAGTGGAGACGTGGAATTTGAAGAAAGTGAGCCCGACGATGGACTAGGAGATAATGACATTGATGAGATGAGATTCAAAGCAAAGCAAACTCGGCGCCAAAAACAGCATAAAGATAAATCTCGTCACAAAACGTCTCACAGGCGTCATTAA

Protein

Uniprot

Uniprot term	Description
A7RNZ0	Nematocyst expressed protein 4 OS=Nematostella vectensis OX=45351 GN=v1g239676 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01549	ShK	ShK domain-like	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003582	Domain	ShKT domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21724	UNCHARACTERIZED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K16720	RCD2; reduction in cnn dots 2	-	Chromosome and associated proteins	ko03036	deepkoala