Detailed information of gene19925.t1 in Actinoscyphia liui

Genomic Location: chr5:37306504...37354864
NR annotation: KXJ18722.1, Polycystic kidney disease protein 1-like 2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q2EG98Polycystin-1-like protein 3 OS=Mus musculus OX=10090 GN=Pkd1l3 PE=1 SV=3
Q9Z0T6Polycystin family receptor for egg jelly OS=Mus musculus OX=10090 GN=Pkdrej PE=2 SV=2
Q9NTG1Polycystin family receptor for egg jelly OS=Homo sapiens OX=9606 GN=PKDREJ PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01825GPSGPCR proteolysis site, GPS, motif MotifInterproscan
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF01390SEASEA domainFamilyInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF02010REJREJ domainFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000082DomainSEA domainInterproscan
IPR051223FamilyPolycystinInterproscan
IPR000203Conserved_siteGPS motifInterproscan
IPR027359Homologous_superfamilyVoltage-dependent channel domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR036364Homologous_superfamilySEA domain superfamilyInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR046791DomainPolycystin domainInterproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan
IPR014010DomainREJ domainInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan

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