Gene detail

Detailed information of gene20190.t1 in Actinoscyphia liui

Genomic Location: chr5:42583891...42590470
NR annotation: XP_020909272.1, uncharacterized protein LOC110247209 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene20190.t1

ATGTGGGGAAATGCAGATGAAGAACTCCATTTGTCAACCAAAGACAAAAAGCTCTTTACCCCCGGTCCTCTTGGAACATCATTTGAAACTAAGAAAGTTATGCTGAGAGACGTTGGTTCTAGAGATGAAGATTTTATTAGCTGTGTCCAATTTATACGACGTAAGCTGCTAGAGGTGGCTGGTGTCTCTCCAAAGGATTACACAACAATACCCATACAGGGCAGTGGGACGTACTCTGTGGAATCCGTACTAACAACAGCCACACCCAAAGAGGGTGCAAAACTGTTAATAGTAGTCAGTGGTGCTTATGGGAAACGTATGGTGAAGATTTGTGAAGTTGCAGGCATTGACACAATTGTTCTTGAAGGCCCTGAAGACCAAAAAGCTGATGTAGATGCAGTAGAAAAGATTCTCCAACAAAACCCAGACCTTAGTGGTGTCTGCATCGTGCACTGTGAGACAACCTCAGGTGTCATCCACCCTGTCGAAGCTGTTGGCAAACTGGTGCAAAAATACACCCCAAATGCATTTTTCTTTGTTGACGCCATGAGCAGTTTTGGTGCCATTCCACTGAATTTTGACCATGCCCATATTACGTACTTGGTGAGCTCTGCTAATAAATGTATAGAAGGTGTACCTGGATTTTCTTATGTCATTGCTAACATTGAACATGTAAAGAAGTGCAAGGGACAATCAAGAACTCTTTCCCTAGATTTTGTTGATCAGTATGAGGGTCTAGAAAAGTCTGGTCAGTTCAGGTTCACACCACCAACACACGCAATGCTGGCCTTCAGGAATGCTTTGCAGGAGCTTGATGAGGAGGGTGGAGTTGTTGGAAGAGCCAAGAGGTACATGGACAATAGACATATCATTCGTGATGGCATGAAAAAGTTTGGCTTCAAGGAGTTCTTGGACGACACCCATGAGGGGTACATCATTACATCGTTCCACTACCCCAAGCATACCAACTTTGAATTCTCAGACTTCTATAAGCGACTCAGTGACAAAAATCAAGTCATCTACCCAGGAAAAGTCACCAAGATGGATTGCTTTAGGATTGGTAACATTGGCTATTTGTTCCCAAAGGATATAGAATACTTGTTGCAGTGTGTTGAAGAAGTGCTACAAGACATGAACATCCCAATACCACTGGAAGAGTGACTTATGGACATCCCAGCATGACTTGACGAGTGACTTATGAACATCCCAATACCACTTGAAGAGTGACTTATGGACATCCCAGCATGACTTGATGAGTGACTTATGAACATCCCAATACCACTTGAAGAGTGACTTATGGACATCCCAGCATGACCTGAAGAGTGACTTATGAACATCCCAATACCACTTGACGAGTGACTTATGAACATCCCAGCATGACTTGAAGAGTGACTTATGAACATCCCAATACCACTTGAAGAGTGACTTATGGACATCCCAGCATGACTTGACGAGTGTCTTAGGAACTCATTGTGAACTTAAAAGTCTGAATATCAGTGTTGAAGATCTGGAAGCCATTACTCTTGTGGGTTACAAGTTTTATCCTTAGCTAGAAGAATTATTGACATAATTACATAACAATAGAAAAGATGATTTCCTTTTCTCATTCATTGCTTACAATCAGGCCATCATACCTATTCCAATCATTAGAGTTATTTTCGTTTGAGTGGGAAGTATTACGCGTACGGTCCTTGCAGTTCCGTGCCGTGACCGTGACGGTACCGTATCCGAGCATTCTGATTGGGTGAGCATTGATTTCGTGCGCTGTGATTGGTTGAATAGATGACCGTGATTCCGTACCGTGACCGTAACCGTGCCGTACTACTTCCTACTCATACGAAAACGACTCTGTTTCATTTATCCTGCAATAGTTAAAAAAATGGAAAGTAGAATGTACACTGAAAGTGCCAAAAAATATATTTACAAATGAGCCTTGAAATGTAGCTGGGGAATAGCTAGGACTTTAAAAAGAAAATGTACATTGTATAGAAGGGAATGTGTGTATATGAAAATAAAAAAAGAAAGAGTTTCTTAACTCTTTTCCAACCGTGAACGTTCAAGGTATTACAACCAAACCATTTTCATTGAAGTGACCTTCAAAACATTTGTCTGGTTGGAAAATAGATGGACGTAAATCAGACAATCTGGGTGTGTCCAGCCTTTAACCAATTCTGGCTAAGTTATTTTGATTGACGGACGTCTTGTTAGATAGGTGTTGGTTTGAGAGCAATACCAACTCTGGAATCTGTACTGACAATTTAATTAGTTTCCCCCGCAGCCGTTTTTAGGGTCGTCACGCAACGCGCTCTCTCCCCAACGAACACAACAGCCACACCCAGAGAGGGTGCGGGAAACGTACGGTGAAAATTTGTGAAGCTAATTATAAGTTAATTGCAGCCGCATTGACACAGTAAGTTGTGTTCCTGTGGACTACATATCGATTATTGGACGATCGAATTGGATGTTTCGTTTTTGCTTCGCCGATTGAGCTGCATGTACACACGAGGAAAAGAGAAAAGCAGAAGCAGGGCCATGCGAGCTATTTTCGGCTCTTCGTGTACGGGGACAGTATACGTCACAATATACAATACAATGGAAACAAATCATATGGCAAGGACACTCAGAGATAGCCTCAAAGTTAAACAATAGAGGGATTTCACGGCAGCTATCTTTATGGTCAATATAGACTTTTTGTTCCAAGAGAAATGAAATGTTTTGTCATTCAAAGATGCGAACTTTGTTTCTGCCCACAAAGATGGCTGCTATGAAATCCCTCTATACCATGCAAGACAGAGCGGAACTAACAATATAATACATTCTGGTACTATACACAGAGCCGAAGGACCCCTACTATTGTGTGCCAGCTCCACTTTAGGCTCGATTTCCAGCAGTGGTGGTTTTGGACACGCCCGCGAGGACAAGCGACACCATCACGGCTAAAACCGAGCCTAGTTCCAGTACAGCACCACTTTAATTAAATATTGCAATGAGCCGGCCAATAGCCACGAACTTACCTATCACTGAGCCATGCAGCCCACATTAAACAAGCTATACATTCAATATTCTCAATGCTTGCATTTTTAAATATTAAAAGATTTTCACCGTACGTTTACATGCATGCAGTATTATATAGTGCTACTCGGGTCTTCGGCCCTCGCAAGCCAGGGTATATGATTAAGCATCGAGTTTTCCGTGAAAGTCAAACGTGACCATGATTTAATTTCCCATGGTTTTGTGACCATCATTTTCCATGATTTTCGCGTTTGTACGTGAAGAAGGCTATTTTGTAAACGAGAGTATTTCTAGTTTGGAAGTTTTTCTCATTTGTTTGTTATCCATTATAAAGCCAATTCGTGGTCACGTTTGACGTTCACGGCAAACGCGGTGCTTAATAATCTCTCTAATAAGTCAGTAGCAGATTTCGTATGACTGACAAACTCCGTGTCTCGACGTTTCGATTGATTATTGGATCGACGAGAAATTTTTTTGACCGATCAAAACGTCGAGACACGTCAAGGCACA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q81G81	2-aminoethylphosphonate--pyruvate transaminase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711) OX=226900 GN=phnW PE=3 SV=1
B7HH81	2-aminoethylphosphonate--pyruvate transaminase OS=Bacillus cereus (strain B4264) OX=405532 GN=phnW PE=3 SV=1
B1HPR6	2-aminoethylphosphonate--pyruvate transaminase OS=Lysinibacillus sphaericus (strain C3-41) OX=444177 GN=phnW PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003226 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00266 all species →	Aminotran_5	Aminotransferase class-V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR012703 all species →	Family	2-aminoethylphosphonate--pyruvate transaminase	Interproscan
IPR000192 all species →	Domain	Aminotransferase class V domain	Interproscan
IPR024169 all species →	Family	Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42778 all species →	2-AMINOETHYLPHOSPHONATE--PYRUVATE TRANSAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019700 all species →	Biological Process	organic phosphonate catabolic process	Interproscan
GO:0047304 all species →	Molecular Function	2-aminoethylphosphonate-pyruvate transaminase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene20190.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.