Detailed information of gene20196.t1 in Actinoscyphia liui

Genomic Location: chr5:42609490...42615438
NR annotation: KXJ24750.1, 28S ribosomal protein S18a, mitochondrial [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q20EV2Small ribosomal subunit protein bS18c OS=Oltmannsiellopsis viridis OX=51324 GN=rps18 PE=3 SV=1
A6MVX7Small ribosomal subunit protein bS18c OS=Rhodomonas salina OX=52970 GN=rps18 PE=3 SV=1
O78488Small ribosomal subunit protein bS18c OS=Guillardia theta OX=55529 GN=rps18 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009320 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01084
all species →
Ribosomal_S18Ribosomal protein S18FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001648
all species →
FamilySmall ribosomal subunit protein bS18Interproscan
IPR036870
all species →
Homologous_superfamilySmall ribosomal subunit protein bS18 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13479
all species →
30S RIBOSOMAL PROTEIN S18Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →
Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →
Cellular ComponentribosomeInterproscan
GO:0006412
all species →
Biological ProcesstranslationInterproscan
GO:0005763
all species →
Cellular Componentmitochondrial small ribosomal subunitInterproscan
GO:0032543
all species →
Biological Processmitochondrial translationInterproscan
GO:0070181
all species →
Molecular Functionsmall ribosomal subunit rRNA bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene20196.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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