Genomic Location: chr5:44330413...44345548
NR annotation: XP_020894271.1, alpha-actinin-1 [Exaiptasia diaphana]
| CDS | |||||
| gene20295.t1 | |||||
| Transcript |
| gene20295.t1 |
| Protein |
| gene20295.t1 |
| Uniprot term | Description |
|---|---|
| P05094 | Alpha-actinin-1 OS=Gallus gallus OX=9031 GN=ACTN1 PE=1 SV=3 |
| Q3B7N2 | Alpha-actinin-1 OS=Bos taurus OX=9913 GN=ACTN1 PE=2 SV=1 |
| Q9Z1P2 | Alpha-actinin-1 OS=Rattus norvegicus OX=10116 GN=Actn1 PE=1 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13499 | EF-hand_7 | EF-hand domain pair | Domain | Interproscan |
| PF00435 | Spectrin | Spectrin repeat | Domain | Interproscan |
| PF00307 | CH | Calponin homology (CH) domain | Domain | Interproscan |
| PF08726 | EFhand_Ca_insen | Ca2+ insensitive EF hand | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001715 | Domain | Calponin homology domain | Interproscan |
| IPR002048 | Domain | EF-hand domain | Interproscan |
| IPR018159 | Repeat | Spectrin/alpha-actinin | Interproscan |
| IPR036872 | Homologous_superfamily | CH domain superfamily | Interproscan |
| IPR002017 | Repeat | Spectrin repeat | Interproscan |
| IPR001589 | Conserved_site | Actinin-type actin-binding domain, conserved site | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR011992 | Homologous_superfamily | EF-hand domain pair | Interproscan |
| IPR014837 | Domain | EF-hand, Ca insensitive | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11915 | SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005886 | Cellular Component | plasma membrane | Interproscan |
| GO:0030036 | Biological Process | actin cytoskeleton organization | Interproscan |
| GO:0030054 | Cellular Component | cell junction | Interproscan |
| GO:0030864 | Cellular Component | cortical actin cytoskeleton | Interproscan |
| GO:0042995 | Cellular Component | cell projection | Interproscan |
| GO:0051015 | Molecular Function | actin filament binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K05699 | ACTN1_4; actinin alpha 1/4 | - | Exosome | ko04147 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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