Gene detail

Detailed information of gene20395.t1 in Actinoscyphia liui

Genomic Location: chr5:46056205...46065019
NR annotation: XP_020896792.1, dihydroxyacetone phosphate acyltransferase [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene20395.t1

GGGAAATCCAGCTGCACAGAAGTGCTCACCTCTGATAGAACAACGCAAGAGATCAAAAAGTCCCAGTTTCGAACCACGAAATAATTCCAAAGTTAAAGCATCTAGACAAAGAGACTTGCTAAATCGCCACATGCTATCCGAGTTTGTATTCATTCACTTGGATCTTCTTAATTTGGCATTGGCATTCGAAAAAAGTTCCGGCTTCTACAATTACGCAAGTTGCATATTATTGTTTCTTTGAGCTCCTAAATTGTACCTCGAACGGAAACATGGAGGCTTTTGATGTGGACGTATTGAAGACAGACAGTTTCAGCGATCTGTTGTGGACTCTGAAATCCTACAACCCCAAACGATACAAATACTCTGTGCAGAGAAATCCAGAAGAAATCAAAGGCGATGTGCTGGAATCGAGACGAGTTACACATATCATTGAGGAGACTGCTAAAGAGCAAGGCAAAGCTATCTCTGATGTTAAAGACCAAGCCAAGGCCATACTTGACGAGATGGGACATAATTACAACATGAAAACATTACGTTTTATGGCGTACATGATGAAAAAGATTTTGTCAACCCTACTTAGAAAAGTGCTAGTTAACAAGAAAGGTCTTGATAGGCTGAGAGAGGCATCTATACACAACCCTGTTGTACTAATGCCGTGTCACAGAAGCTACCTGGACTTTCTTCTTGTTTCTTTTATATGCTTTCATGCAGACCTTCCATTACCATTCATTGCTGCTGGACAGGACTTCATGAATATGAGGGTAGTAAGAAGGCTGTTTAGGCACAGCGGTGCATTCTTTATGAGACGATCATTTGTAAATGATAAACTGTACTGGGTGATCTTTGCTGAATATCTACAGAACCAACTCCAAAAGGGTGACAAACCCCTGGAGTTCTTCCTTGAGGGAACAAGAAGTCGAACGGGGAAGTTTCTCCATCCAAAGTTAGGTCTGCTCTCTATGGTTGTAGACCTCTACGCCAATGCTGGTGTGCCCAATGTTCAGTTATGTCCAATTAGCATAAGCTATGACAAAGTACCTGAAGAATCACTGTTTGCCTATGAATTGCTTGGTATCCCCAAACCAAAAGAGTCCCTCAGAGGGCTGATCAGAAGTAGATCAGTTCTCTCTGAAGATTATGGAAACATTTATATCAACTTTGGTGAATTGATTCCTTTGAGCAGTTGCATTGAAGGAAAACTGGATAGAATGGCGACTGCATCAACACCAAGACATCTATTGTTATATCTGACTGATGAAGAGAAGGAAGTGGTGCGTCAAACTGGTTATGACATCATTGCTAAACTGCAAGCTTCTATGGTTGTTACGTCATCGGTTATAATAGCTACCATAATGCTACAGAACCCACAAGGTTTATTTTTTGATGATGTCGTGACTAAGTTTGAATGGCTGCAAGATCTGTTTAAGATATTAAAAATACCTCTGGCTCCTGCAGATTACCCAAAGACAAAAGACGTTGTCATAGATGGCATTAATCTTCAAAAATCAAGCCTGGAAATAGATGATGATGGTTGTGTGAAGATCATAGCACCCCAAGTACTCCCAGTTACACAGCATGGCGCTGCTGTAGCGCATGCCTCACGGCAACAGCATCATGTTATCAGTTCTGTCAAAGATGTCCTAGATGAGGCATCTATTCACTTACAGCTTGCCTACAAGCGAAATACATTGCTTCCTTACTTTTTTGGAATTGGCATGGTTTCTATGGCAACCCTGAAACAGCAACGTCATTTGAAAGATATAGGTATTTTGACAGAGGACTTCAATTTTCTGTCAGCCCTTCTCATTCGGGAGGTGTCAGGGCTTGCAGAAGCTCTACCTAAGGTTTTTCAGCAAACTTTGGAAACCATGCAAGAAAACAATATCTTGGTCTATAACAGCAATAACTGTTTTACCATCCATGAAGAGGCTTGTTTGGAATTTGCAGCTGGTCTATGGATGCCGTTACTCACTGCATACTGGGTAAGCTAACCTCTTTTTCTAACCCTCTCTTAATTGCTGCATAAGCA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9ES71	Dihydroxyacetone phosphate acyltransferase OS=Rattus norvegicus OX=10116 GN=Gnpat PE=1 SV=1
O15228	Dihydroxyacetone phosphate acyltransferase OS=Homo sapiens OX=9606 GN=GNPAT PE=1 SV=1
G1SPE9	Dihydroxyacetone phosphate acyltransferase OS=Oryctolagus cuniculus OX=9986 GN=GNPAT PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005941 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19277 all species →	GPAT_C	Glycerol-3-phosphate acyltransferase C-terminal region	Family	Interproscan
PF01553 all species →	Acyltransferase	Acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022284 all species →	Family	Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase	Interproscan
IPR002123 all species →	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR045520 all species →	Domain	GPAT/DHAPAT, C-terminal domain	Interproscan
IPR041728 all species →	Domain	GPAT/DHAPAT, acyltransferase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12563 all species →	GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004366 all species →	Molecular Function	glycerol-3-phosphate O-acyltransferase activity	Interproscan
GO:0005778 all species →	Cellular Component	peroxisomal membrane	Interproscan
GO:0006631 all species →	Biological Process	fatty acid metabolic process	Interproscan
GO:0008374 all species →	Molecular Function	O-acyltransferase activity	Interproscan
GO:0008611 all species →	Biological Process	ether lipid biosynthetic process	Interproscan
GO:0008654 all species →	Biological Process	phospholipid biosynthetic process	Interproscan
GO:0016287 all species →	Molecular Function	glycerone-phosphate O-acyltransferase activity	Interproscan
GO:0019432 all species →	Biological Process	triglyceride biosynthetic process	Interproscan
GO:0031966 all species →	Cellular Component	mitochondrial membrane	Interproscan
GO:0044255 all species →	Biological Process	obsolete cellular lipid metabolic process	Interproscan
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00649	GNPAT; glyceronephosphate O-acyltransferase	EC:2.3.1.42	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.