Detailed information of gene20445.t2 in Actinoscyphia liui

Genomic Location: chr5:46898420...46913080
NR annotation: XP_020899614.1, uncharacterized protein LOC110238295 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9JMD1Scm-like with four MBT domains protein 1 OS=Mus musculus OX=10090 GN=Sfmbt1 PE=1 SV=1
Q9JMD2Scm-like with four MBT domains protein 1 OS=Rattus norvegicus OX=10116 GN=Sfmbt1 PE=1 SV=2
Q9UHJ3Scm-like with four MBT domains protein 1 OS=Homo sapiens OX=9606 GN=SFMBT1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007755 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07647
all species →
SAM_2SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660
all species →
DomainSterile alpha motif domainInterproscan
IPR050548
all species →
FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247
all species →
POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003682
all species →
Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0045892
all species →
Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene20445.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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