Detailed information of gene20481.t1 in Actinoscyphia liui

Genomic Location: chr5:47585690...47595025
NR annotation: XP_031565169.1, biogenesis of lysosome-related organelles complex 1 subunit 2-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A7RZS0Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Nematostella vectensis OX=45351 GN=bloc1s2 PE=3 SV=1
Q32WR5Biogenesis of lysosome-related organelles complex-1 subunit 2 OS=Rattus norvegicus OX=10116 GN=Bloc1s2 PE=2 SV=1
Q9CWG9Biogenesis of lysosome-related organelles complex 1 subunit 2 OS=Mus musculus OX=10090 GN=Bloc1s2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007697 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10046
all species →		BLOC1_2Biogenesis of lysosome-related organelles complex-1 subunit 2 Coiled-coilInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR053236
all species →		FamilyCornifinInterproscan
IPR019269
all species →		FamilyBiogenesis of lysosome-related organelles complex-1, subunit 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13884
all species →		DUF853 DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
No Gene Ontology signature was recorded for gene20481.t1 in Actinoscyphia liui.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene20481.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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