Detailed information of gene20560.t1 in Actinoscyphia liui

Genomic Location: chr5:49406004...49427617
NR annotation: XP_028513910.1, HEAT repeat-containing protein 5B [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1A5F2HEAT repeat-containing protein 5B OS=Xenopus tropicalis OX=8364 GN=heatr5b PE=2 SV=1
Q9P2D3HEAT repeat-containing protein 5B OS=Homo sapiens OX=9606 GN=HEATR5B PE=1 SV=2
Q8C547HEAT repeat-containing protein 5B OS=Mus musculus OX=10090 GN=Heatr5b PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003335 (this species only)

 Pfam domain
No Pfam domain signature was detected for gene20560.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011989
all species →
Homologous_superfamilyArmadillo-like helicalInterproscan
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR040108
all species →
FamilyLaa1/Sip1/HEATR5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21663
all species →
HYPOTHETICAL HEAT DOMAIN-CONTAININGInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005794
all species →
Cellular ComponentGolgi apparatusInterproscan
GO:0006897
all species →
Biological ProcessendocytosisInterproscan
GO:0008104
all species →
Biological Processprotein localizationInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0030139
all species →
Cellular Componentendocytic vesicleInterproscan
GO:0042147
all species →
Biological Processretrograde transport, endosome to GolgiInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene20560.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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