Genomic Location: chr5:51539714...51540826
NR annotation: CAB4032224.1, Transposon Ty3-G Gag-Pol poly [Paramuricea clavata]
| CDS |
| gene20706.t1 |
| Transcript |
| gene20706.t1 |
| Protein |
| gene20706.t1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00589 | Phage_integrase | Phage integrase family | Family | Interproscan |
| PF02899 | Phage_int_SAM_1 | Phage integrase, N-terminal SAM-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR002104 | Domain | Integrase, catalytic domain | Interproscan |
| IPR013762 | Homologous_superfamily | Integrase-like, catalytic domain superfamily | Interproscan |
| IPR004107 | Domain | Integrase, SAM-like, N-terminal | Interproscan |
| IPR044068 | Domain | Core-binding (CB) domain | Interproscan |
| IPR010998 | Homologous_superfamily | Integrase/recombinase, N-terminal | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR35617 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0015074 | Biological Process | DNA integration | Interproscan |
