Detailed information of gene21095.t1 in Actinoscyphia liui

Genomic Location: chr6:3155906...3166317
NR annotation: XP_020908551.1, actin-like protein 6B isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O94805Actin-like protein 6B OS=Homo sapiens OX=9606 GN=ACTL6B PE=1 SV=1
A4FUX8Actin-like protein 6B OS=Bos taurus OX=9913 GN=ACTL6B PE=2 SV=1
Q99MR0Actin-like protein 6B OS=Mus musculus OX=10090 GN=Actl6b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006706 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00022
all species →
ActinActinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004001
all species →
Conserved_siteActin, conserved siteInterproscan
IPR004000
all species →
FamilyActin familyInterproscan
IPR043129
all species →
Homologous_superfamilyATPase, nucleotide binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11937
all species →
ACTINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003682
all species →
Molecular Functionchromatin bindingInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007399
all species →
Biological Processnervous system developmentInterproscan
GO:0016514
all species →
Cellular ComponentSWI/SNF complexInterproscan
GO:0035267
all species →
Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0043044
all species →
Biological Processchromatin remodelingInterproscan
GO:0043967
all species →
Biological Processobsolete histone H4 acetylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene21095.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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