Detailed information of gene21641.t1 in Actinoscyphia liui

Genomic Location: chr6:13486170...13503198
NR annotation: XP_020903904.1, sphingosine-1-phosphate lyase 1 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8CHN6Sphingosine-1-phosphate lyase 1 OS=Rattus norvegicus OX=10116 GN=Sgpl1 PE=2 SV=1
Q8R0X7Sphingosine-1-phosphate lyase 1 OS=Mus musculus OX=10090 GN=Sgpl1 PE=1 SV=1
O95470Sphingosine-1-phosphate lyase 1 OS=Homo sapiens OX=9606 GN=SGPL1 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003430 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00282
all species →		Pyridoxal_deCPyridoxal-dependent decarboxylase conserved domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR050477
all species →		FamilyGroup II Amino Acid DecarboxylasesInterproscan
IPR002129
all species →		FamilyPyridoxal phosphate-dependent decarboxylaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR42735
all species →		-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0008117
all species →		Molecular Functionsphinganine-1-phosphate aldolase activityInterproscan
GO:0030149
all species →		Biological Processsphingolipid catabolic processInterproscan
GO:0016830
all species →		Molecular Functioncarbon-carbon lyase activityInterproscan
GO:0019752
all species →		Biological Processcarboxylic acid metabolic processInterproscan
GO:0030170
all species →		Molecular Functionpyridoxal phosphate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01634SGPL1, DPL1; sphinganine-1-phosphate aldolaseEC:4.1.2.27
Sphingolipid signaling pathwayko04071deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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