Detailed information of gene21995.t1 in Actinoscyphia liui

Genomic Location: chr6:20302590...20328092
NR annotation: XP_020911792.1, farnesyl pyrophosphate synthase [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P08836Farnesyl pyrophosphate synthase OS=Gallus gallus OX=9031 GN=FDPS PE=1 SV=2
Q8WMY2Farnesyl pyrophosphate synthase OS=Bos taurus OX=9913 GN=FDPS PE=1 SV=1
P14324Farnesyl pyrophosphate synthase OS=Homo sapiens OX=9606 GN=FDPS PE=1 SV=4
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004118 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00348
all species →		polyprenyl_syntPolyprenyl synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033749
all species →		Conserved_sitePolyprenyl synthetase, conserved siteInterproscan
IPR039702
all species →		FamilyFarnesyl pyrophosphate synthase-likeInterproscan
IPR008949
all species →		Homologous_superfamilyIsoprenoid synthase domain superfamilyInterproscan
IPR000092
all species →		FamilyPolyprenyl synthetaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11525
all species →		FARNESYL-PYROPHOSPHATE SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004161
all species →		Molecular Functiondimethylallyltranstransferase activityInterproscan
GO:0004337
all species →		Molecular Functiongeranyltranstransferase activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0008299
all species →		Biological Processisoprenoid biosynthetic processInterproscan
GO:0016765
all species →		Molecular Functiontransferase activity, transferring alkyl or aryl (other than methyl) groupsInterproscan
GO:0045337
all species →		Biological Processfarnesyl diphosphate biosynthetic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00787FDPS; farnesyl diphosphate synthaseEC:2.5.1.1
EC:2.5.1.10
Prenyltransferasesko01006deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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