Detailed information of gene22940.t1 in Actinoscyphia liui

Genomic Location: chr6:37369449...37387395
NR annotation: XP_020917803.1, host cell factor 2 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99J86Attractin OS=Rattus norvegicus OX=10116 GN=Atrn PE=2 SV=1
O75882Attractin OS=Homo sapiens OX=9606 GN=ATRN PE=1 SV=2
Q9WU60Attractin OS=Mus musculus OX=10090 GN=Atrn PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009263 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13415
all species →
Kelch_3Galactose oxidase, central domainRepeatInterproscan
PF13964
all species →
Kelch_6Kelch motifRepeatInterproscan
PF01344
all species →
Kelch_1Kelch motifRepeatInterproscan
PF13418
all species →
Kelch_4Galactose oxidase, central domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915
all species →
Homologous_superfamilyKelch-type beta propellerInterproscan
IPR006652
all species →
RepeatKelch repeat type 1Interproscan
IPR051568
all species →
FamilyLZTR1/AttractinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46376
all species →
LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005794
all species →
Cellular ComponentGolgi apparatusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene22940.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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