Gene detail

Detailed information of gene22987.t1 in Actinoscyphia liui

Genomic Location: chr6:38225175...38240879
NR annotation: KXJ08354.1, Prolow-density lipoprotein receptor-related protein 1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P98156	Very low-density lipoprotein receptor OS=Mus musculus OX=10090 GN=Vldlr PE=1 SV=1
P98166	Very low-density lipoprotein receptor OS=Rattus norvegicus OX=10116 GN=Vldlr PE=2 SV=1
P35953	Very low-density lipoprotein receptor OS=Oryctolagus cuniculus OX=9986 GN=VLDLR PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00057	Ldl_recept_a	Low-density lipoprotein receptor domain class A	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036055	Homologous_superfamily	LDL receptor-like superfamily	Interproscan
IPR023415	Conserved_site	Low-density lipoprotein (LDL) receptor class A, conserved site	Interproscan
IPR002172	Repeat	Low-density lipoprotein (LDL) receptor class A repeat	Interproscan
IPR051221	Family	Low-density lipoprotein receptor-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22722	LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0006898	Biological Process	receptor-mediated endocytosis	Interproscan
GO:0016324	Cellular Component	apical plasma membrane	Interproscan
GO:0042562	Molecular Function	hormone binding	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan