Detailed information of gene23210.t1 in Actinoscyphia liui

Genomic Location: chr6:41864495...41871493
NR annotation: XP_020897893.1, chitin-binding domain protein cbd-1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q70E20Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2
P49013Fibropellin-3 OS=Strongylocentrotus purpuratus OX=7668 GN=EGF3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01607CBM_14Chitin binding Peritrophin-A domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036508Homologous_superfamilyChitin binding domain superfamilyInterproscan
IPR002557DomainChitin binding domainInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12916CYTOCHROME C OXIDASE POLYPEPTIDE VIC-2Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008061Molecular Functionchitin bindingInterproscan
GO:0005576Cellular Componentextracellular regionInterproscan
GO:0005112Molecular FunctionNotch bindingInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan

TOP