Gene detail

Detailed information of gene23234.t1 in Actinoscyphia liui

Genomic Location: chr6:42092178...42096549
NR annotation: XP_020917787.1, uncharacterized protein LOC110255068 isoform X1 [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O88696	ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Mus musculus OX=10090 GN=Clpp PE=1 SV=1
Q16740	ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Homo sapiens OX=9606 GN=CLPP PE=1 SV=1
Q2KHU4	ATP-dependent Clp protease proteolytic subunit, mitochondrial OS=Bos taurus OX=9913 GN=CLPP PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00574	CLP_protease	Clp protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR033135	Active_site	ClpP, histidine active site	Interproscan
IPR001907	Family	ATP-dependent Clp protease proteolytic subunit	Interproscan
IPR018215	Active_site	ClpP, Ser active site	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR023562	Family	Clp protease proteolytic subunit /Translocation-enhancing protein TepA	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10381	ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004176	Molecular Function	ATP-dependent peptidase activity	Interproscan
GO:0004252	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0006515	Biological Process	protein quality control for misfolded or incompletely synthesized proteins	Interproscan
GO:0009368	Cellular Component	endopeptidase Clp complex	Interproscan
GO:0051117	Molecular Function	ATPase binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01358	clpP, CLPP; ATP-dependent Clp protease, protease subunit	EC:3.4.21.92	Peptidases and inhibitors	ko01002	deepkoala