Gene detail

Detailed information of gene23542.t1 in Actinoscyphia liui

Genomic Location: chr6:46466697...46473526
NR annotation: XP_020896253.1, GPI ethanolamine phosphate transferase 2 isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene23542.t1

Transcript

gene23542.t1

ATGTGGCGAACAATAACGTTATTTTGGCTTTTGCTTCTACAACTTGTTGGTTTGTCTCTGTTCTTGAAAGGATTCTTTCCTCTCAAGCAAGCTATTCCTGGATCAGCATCGTTCCTGGACTTACCACCAGAGCCAGGAAGCACAGAGACAGGGTATCGTTCACCAGCAGTGTTTGACAGACTGGCATTAGTGCTGATAGATGCCCTACGAGCTGACTTTGTTTTTAATAACACAAAAATGGAGTACATCAGAACTCTTATTGATAACAATAATACATTAAGTTTCATAGCCAGGGCACACTCTCCAACAGTAACAATGCCTAGAATCAAAGCCCTCATGACGGGAGGTATTCCTGGTTTTGTAGACGTGGTATTCAATTCAGTATCTACAGCCCTTCAAGAGGACAGCTTGTTAACACAATCAGTATCTGTTGGTAGAAAGATTGTCTTCTTTGGAGATGACACTTGGATGAAGTTATTTCCTGGTCACTTTTTGAGAAGTGAAGGCACAACGTCATTTTTTGTGACTGATTATTCTGAGGTTGACAACAATGTAACAAAGCATCTTGATAAAGAACTTAAAAGTACAGACTGGGACATGATGGTCCTTCATTACCTGGGGCTAGATCATATAGGGCACCTTGCAGGACCCAATAGTCCCTTAGTGGGCCCTAAACTACAGGAGATGGATTTCATCATAGAGAAAATCCACAGAAGCCTTCTCAAGGATGACAGTGAAAGAGGAATGAACTCGCTGTTAATGCTTTGTGGTGACCATGGGATGAGTGATTCTGGTAGTCATGGCGGAGCTACGCCTCCTGAGACTTTAACGCCTCTAGTGTTTCTTGGCTCTCGTTTTCAGAATGGGAAAGGATCAGCATTTTCTGGTCAGATAGTTGATCAAATTGATGTAGTATCTACTTTAGCAACAGTGCTTGGGCTACCTATACCACAAAACAGTGTTGGATTCCTCATACCTCAAGTCCTAGCATTTCACAGCCCAAGAGACAAGCTAAGGTCTTTACAAATCAATGCTCACCAACTCACCAAAGTTTTAAAAGCAAATGGTCACAAAACTAACACCATCTGGGAACAAGACGAAGCGTACCATTTACACCGTAGATGGCTTGAAGCAACGAAAAGCGAGAACCAGGACGTAAAGACTATGAAGATTCAAGCTGATCAAGTAGTTAAACAGTACATGAAGGCACTTAATACTATGAGTAGTCAGATCACTGCCTCACTCTCTTGCTACGACTTATATTCCATGGTGTGTGGGATAGTAGTTCTACTGCAAGTATTTGCTTGGCTGGCTTATAAAGAACTGTACCATAGTAATACACCAAGAAAGACTTCTGTTTTTATTCAAAGTGTCATGCCTTCGGTTTCATCTTTCTTCGCCATGGGTGCCTGCTTCTTGGTGCTGGTCGCTGTTCATCTGTCAGTGTGTTCAAGTACTTTAGTATCTGGAACTTGCAGTAGTGAAACTCTCTGCTCCAAGCAGCCTTCAGCCATCTTCTTTTCTGCCATTTTCGTGTTTTTCAGTAGTGTTTCAATCAGCGCTGTCATTACTAACATAGACACGACTCCATCTCTCTTTCGTCATGTTATTCAGGAAATCAAGCCCATGTTATCATCTCCACTTCAAAGTCTGCTTGTTTTGGGGACTATTTTTCACGTTTTTAGCTTATTGTCCAGTAGTTTTGTTGAAGAGGAACACCAAACTTGGTATTTCTTGGTGAAAACGTATTTTATCGTCTATTTTTGTACATCTGTAAAAGGTTACTTCAAAGAAAGAAGCCAGGGGCCGCAGTCTTGTAACCACGAAAAACTGCATAACTGTATCTCAGAAGAATTGTTGAAAGATCATCAAATACCAAACAAACTACAAATACGTTCACAACTTAACGAAGAACTTAACGAGAAGCATTGTATTCCGCATCATGAAAAGACAGAGAAAGAAACATGGTTTTCGTTAGTAATTCCCTTGGTTTGTCTAGCTTTTGTACGTATTTTACGAACGTGGAATCAAACGGGCATCAAATGGGCTGACCAACCTGACATAGGCGACTGGTTAGTCCTACCACACAACAAACTCGTACTCTCCTTGGTATCCGCGTCTTCACTATTCGTTATACTCATATGCACCTTTAAACGCAGTGACGTCATAACCACTATACTCCAAGCACTGGGACTGTTATTCGTATATCATTACCGCGCAGCCACTGGGGTAGTATGGTCGCCATTGACAACCAGCCAGCCAATCACGCAAGGGCTAACGGAAGCTGGAATGGCGTATGCCTGCTCGTTTGTTTTATTGTTTGTCTCGTTAGTAAAGTTTAGAAGAGCTTACAAGTATGAAAGTTCTACAGACAGTCCTGATGGATTTGTCATATACAGGAGTATAGTGGAAGGATCAGTGCAGTCGTTTACTGCTGGGATCGTTGTGCTGGCAGCGTTAGTACTTAGAGTCCATAATGTATTTCTACTTGCAGTCTTTATAGTTCAGGAATGGTGCTTTAGTACATGCCTCAGTAAAACCAAGGCTATTTCCTGGACAACTTACCTCATCTACTTCTGGTTTGGACAAGTAGCGTACTTCTCCCTGGGTAACTCTAATAGTCTCTCAACAATAGACATTGCCGCTGGCTACATAGGAATGCAGGCACATGATTCAGCTGTAGTCTTTATTCTCTTGGCTTTCACCACGTACTGTGGTCCATTGCTATGGCTGACGGCACTGGTGCGATTTGTAGTGAAGAATTCATCGTCAAGGGAACAGTTGCGTGACAGCCTCTACAATCTGTGTGTGACCTACACTCTGCCCCAGTCCTTGCTCCTATGTGTGTACACAATCCTGGTATACGGTCAGCGGTATCACCTATTTGTATGGAGCGTATTCTCTCCTAAGTTACTATACGACACAATGAGAACTCTAGTCATGCTTGTCAGTAGTACTTTAGTGTTAGTATTTAGTGCTGTTATAGGTAGAACAACAGATTTGTATAAGTCAGACTAAACTCGACAAATGGGAAGGGAGTATTTGTTCCCTTTCTCTTCTCTTTTTTTTTTCGATCCTCTATAAGTAGCCAACCTCTATTTAGCGGCCAGTTGTCAACGTCCCAAAGACTGTTTTAGCTTTGTTTTACAGATAAAGCCGCTAACCTCTATTTAGCGGTCACTTGACAATTCCTCGAGGGTGGTCGCTTAATAGGGGTTCGACTGTACTAGCCACTGGAAACGAACCGTAATTTTTGAGAATTATGTGGTCTTTCCACCTCTCGAACCAAATAAAAAGTGTGTCTATTGTAATTATTTAATAACTTAAAACCATTTTGCTAATTTACAATAATAATTAATCAATGTACAATTTAATTTTCAACGTCTATAAATACAATTTGAATGATACCAATAAATATATATATATATTATTTTTTACAGAATTATCTTTGATGTACATAATATACTGAATGCAGGCATTCCAAAATCATCAATAACGCTAACATGTTTTAAATGTCTGCTAAGCAAGTCCCAGTATAACTTATTTGCTATGGAGAAAAGACGATTTTTTGCGTCTTCGATTCTACACATTCAGAAATAAGTCGTTTTTGTATGAGTGGGAATTATGGTCACGGAACGGAATCAACATCATCTATTCAACCGATCACAGCGCACGAAATCACTGCTTGTTCAAACAGAATGCTCAGACACGATTCATACGGTCACAGCACGGCACGTAACCATTTTCCACTCATACCAAAATGACTCTATGTCGAAGGATTGTTATGTACATGTCTTGCTTGTATGTTTGTGTGGCAACGAATTCTGGTTCCCCGTACTATAGCCTGCTTGACATCCGCTTTTAGTGTCGATGCTACCCGTACTATGGCCATACAAAGGAAGCCAGTTCAGCCATTTCAGGAACTCCCAAAACGATATGATCCCGTTGCCATGGCAATCAATGACATCAAAGGCCTGCTTCATGCTGTTCTCATCCAGACATCCAACAGAAATCATGAGCTGTCTAAACTCATCGTGGTTCAGTGTATCATTATCTTCAACGTCGAAACTCTTGAAATAACTCACGGCCTGGCACAAGATAGAATACCGAGACAAATTGTCAATGTTCTGAAACTTTTCCTCACTGCGAAGCCATGACGCAAACTCCTCAAAACTAACTCGATGGTCGCCGTCTTGGTCAACGAGGAGTGTGTACAGCTCGCTCTGATCCGACCTCAAACCAAGATCGTCCTCGAGCAGTAATTTCATCTCATTTTCCTCCAAATATCCACTGCCGTTCCTGTCGTACTTTTGAAAAAGACTTCGCAGGACGATGGTTGGGACGTCGCTGTTAAAAAATGTGTTTCCAGCCTGCATACTTGTAGGGAGTTGCTGCTGAAAGGTTGTATTTTTTTCCTGTGGTCTAATGTTTTAACTTCGC

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5H8A4	GPI ethanolamine phosphate transferase 2, catalytic subunit OS=Homo sapiens OX=9606 GN=PIGG PE=1 SV=1
Q4WDM5	GPI ethanolamine phosphate transferase 2 OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=las21 PE=2 SV=1
Q2U9J2	GPI ethanolamine phosphate transferase 2 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=las21 PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005636 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01663 all species →	Phosphodiest	Type I phosphodiesterase / nucleotide pyrophosphatase	Family	Interproscan
PF19316 all species →	PIGO_PIGG	GPI ethanolamine phosphate transferase membrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037674 all species →	Domain	GPI ethanolamine phosphate transferase 2, N-terminal	Interproscan
IPR039527 all species →	Family	GPI ethanolamine phosphate transferase 2	Interproscan
IPR002591 all species →	Family	Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase	Interproscan
IPR017850 all species →	Homologous_superfamily	Alkaline-phosphatase-like, core domain superfamily	Interproscan
IPR045687 all species →	Domain	GPI ethanolamine phosphate transferase 2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23072 all species →	PHOSPHATIDYLINOSITOL GLYCAN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006506 all species →	Biological Process	GPI anchor biosynthetic process	Interproscan
GO:0051377 all species →	Molecular Function	mannose-ethanolamine phosphotransferase activity	Interproscan
GO:0030176 all species →	Cellular Component	obsolete integral component of endoplasmic reticulum membrane	Interproscan
GO:0051267 all species →	Molecular Function	CP2 mannose-ethanolamine phosphotransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05310	PIGG, GPI7; ethanolamine phosphate transferase 2 subunit G	EC:2.7.-.-	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	ko00563	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.