Gene detail

Detailed information of gene23737.t1 in Actinoscyphia liui

Genomic Location: chr7:1416049...1445572
NR annotation: XP_020898847.1, V-type proton ATPase subunit H [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

gene23737.t1

GTGCTGGAGTGTGTCGTCTAAAAACTGTGAATTACCGTTAGGATGTCAAGTTATCAACGCATAGATGCTTTAATTACCACAAGTGACACAAATATGGATAGCGAGAGTCATTCTACGGGTGTTGTTATTGCCAGCAGCAAGCTCACTGCTGAAGCTTGTGATGTTAGAAACCAAACTGTTAATTGGCAGTCTTACGTCCAGGGTCAAATGATAAGTAACGATGACTATACTATGATAGCGGATTATGACTGTATGGGACAAGAAGAGAGAGCTAGAATTATACAAACTAAAGGAGATCAGCTTGCAAAGACATGTTTATCTCTACTATCAAGACTAACAAGAGACCAAACTATACGTTATATACTTGTAATTATAGATGACCTACTAAATGAGGAAAGAAGCAGAGTGGTTGTATTTCATGATTTTGCCAAAAAGAATAATGTGAATCTGTGGTCATCATTCCTTGGTCTCCTTAACAGACAAGATCAATTCATTGTTCATCAGGCTGCCGTGATATCTGCCAAACTAGCCTGCTGGGGTAAGGCACGTCTACCTGAGAATGATCTAAGCTTCCTTCTTACCTGGCTTAAAGACAAGCTAACAATGCCGGGTTCTGACTATCTTCATAGTGTGGCACAGTGTCTGCAGCTCATGTTAAGAATAGAATCCTACAAACAGGCGTTTTTTAAGTTGGAGGGAATCACAAGCATCGTATCCACCTTACTAAGCACTAACATTGGATTCCAGTTACAATACCAGCTGATATTCACCTTATGGCTGCTGTCGTTTGATCCTAGAATTGCACAGCGCATGGTGGGAAACAGTTCTGTGATCCCTGTCCTGGCTGACGTCCTTAGGGAATCTGACAAAGAAAAAGTCATTAGGATTATCATTGCTACACTTAGGAATCTCATGGATAAACCAGAAGAAAAGGTCAGAGAAGCATCGGTAATGATGATCCAGAGTAAACTAGTTCATGTTCTTTCAATCCTCAATGGTAAGCCATGGGCAGATGAAGATATTCAGGAGGATGTTGAATATATCTATGACAAACTGGATGAAGTTGTACAAGACCTAAGTAACTTTGATGAGTATGCGGCAGAAGTCAGGTCAGGGAGACTGGAATGGAGTCCAGTGCACAAGTCTGAAAAGTTCTGGAGAGAAAATGCTCATCGTTTGAATGAGAAAAACTACGAACTTTTGAAGATTCTTGCTTGCCTCATGGATACGTCTGATGATTCAACTACTCTCTGCGTAGCTGCACACGATACAGGAGAGTACGTGCGACACTTTCCCAGAGGAAAGCGGGTCATCGAATCACTGGGCTGCAAGGAGAAAGTCATGAAAATGATGACCCATGACGATCCTAACGTCAGAAAAGAAGCTCTGTTAGCAGTACAGAAGGTTATGGTACATAACTGGGAATATCTTGGCAAACAGTTAAAGAGTGTATAACAACCAGACGCCCTAATATATTACATAATCATTTGCAATGGAGATTTGAAAATTGGGGGTATTGACTAGCACGACGCTTACCTTAAATATTTGAATCAAGGGGAATATTCTTGGAAAAATCATTGTTACTATAAACCTTGTATTCTTTTTCTGAGTCACTGTGTGTGAGATTCTGATAGCTAACGAAAAAATATCATTGTACATTGCGAGCAAGAAATATGTTTGTGAAATTGCAAAACTTACTACAAATTAATAAGAAAACATTAATAAGTCCGATAATTAAGACAATCATTTCATATCAATACTGTTTAAAACGAGCAGGAGTGTTTCATTAAGTTTTAAAACATGAGGCGCAGCCGAGTGTTATTATACTTGATAAAACACAAACTTCAAATTAATAAGAAAACATTAAAATCCTACAGTAAGACAATCATTTCATTTCAATACTGTTTAAAACGAGCAGGAGTGTTTGATCAAGTTTTAAAACATGAGGCGCAGCCGAGTGTTATTATTGCATATTAATAAGAAAACATTAAACTCCGATTAGTAAGACAATCATTTCATTTCAGTACTGTTTAAAACGAGCAGGAGTGTTTTATTAAGTTTTAAAACATGAGGCGCAGCCGAGTGTGTATAGACTTGATAAAAGACGAACTGTGAGCTTCAAAAATGCAAACCTTCATTTAATAATTGTTTCATTAATTTTTACTAAAATCTTCAAAATTTATGTTCGTTTGGATGAGAAAATGGAAGTTAAAACTTCATGCCAATGAAGACGAATCTATGTTACAGTCTAAAGACTCCTTCGCGGTTATGATTTTCATTGTTTCTTTCATGAATTATTGTTAGTCCAGAACTGGAAGCAATTTTATCTACGTGCGCGATGAAGAGGAAAATGCGATTTGGGTCGAGTGAGCTATGTTCGTCTCAATTTTCTTTAATTCTTCCCTAAGTTCCCTACCAGTATTTAACCACCCAATCCCAACCCCAAATATAAATGCCCATAAACCTAACCCCAAAATCGCCATAATAAAAGATGATGATATATGTATAAATAGAAGAGTAAAACTAACAACTACAAATACTCATACTGTTAATTAAAGGATCCTTATAGCTAAGGTTTTCGGTTTTACAGATAAACTTAGTGGCGCGTCGTTGGGTCCTCGATTAATATAAAATCATTGATTATCGATTGAGGGGCCCAAACTTGAAATACGAACGAACAAGTGAGGTATATAATAAAGTTAAAGTTTTAGTGTTTAGAATTGTTGAACTGTCTCTCTTTGAGAAGCCCATCATTTTGTTGGCTTTGAACACAGTCAAAGCACTTCGATTCATCTGAAAACATTGCCAGTTCCGACTTCATGCATGTCATTCACAAAAAGAAGAAATAGTATCGGTCCAAGGATCGACCCTTGTGGGACGCCCAACTTGACTTCTGACCACGATATTCCTTGTTGTTTTGGATCCATTTCGC

Protein

Uniprot

Uniprot term	Description
Q9V3J1	V-type proton ATPase subunit H OS=Drosophila melanogaster OX=7227 GN=VhaSFD PE=2 SV=2
Q9U5N0	V-type proton ATPase subunit H OS=Manduca sexta OX=7130 PE=2 SV=1
O46563	V-type proton ATPase subunit H OS=Bos taurus OX=9913 GN=ATP6V1H PE=1 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03224	V-ATPase_H_N	V-ATPase subunit H	Repeat	Interproscan
PF11698	V-ATPase_H_C	V-ATPase subunit H	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR004908	Family	ATPase, V1 complex, subunit H	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR038497	Homologous_superfamily	ATPase, V1 complex, subunit H, C-terminal domain superfamily	Interproscan
IPR011987	Domain	ATPase, V1 complex, subunit H, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10698	V-TYPE PROTON ATPASE SUBUNIT H	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000221	Cellular Component	vacuolar proton-transporting V-type ATPase, V1 domain	Interproscan
GO:0046961	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan
GO:1902600	Biological Process	proton transmembrane transport	Interproscan
GO:0005765	Cellular Component	lysosomal membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02144	ATPeV1H; V-type H+-transporting ATPase subunit H	-	Rheumatoid arthritis	ko05323	deepkoala