Gene detail

Detailed information of gene23786.t2 in Actinoscyphia liui

Genomic Location: chr7:2375376...2381872
NR annotation: XP_020902627.1, hydroxylysine kinase [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene23786.t2

TTTCCCCCATACTGATTTTATTTCATTTTCAAGAAGCTGTGTTACCGGTACGAGCCAGTTGGACAACATAGTCAAGTCTTTGTGCCAACTGAACCATTTCATTCCTATTATACATGACTAGTTTTCCACGTAATCATTCCACAACCGGCAAGAATAATGCATAGAAGGCCTAATGTGACTAACGAGACGGCAGCTAAGGTCGCTCAAAACGTCTTTGGGCTAACAAATATACAGGCAGTCAAAGAGCTATGTAGTTTTTACGACTGCAATTTTTTCCTCAAAACACCACCAAAGGAATATGTGTTGAAAGTTCTCAATTCCTACGACAGCCAACACAAGGAGGAAATCGAAGCCGAGGCAAAAGCTATGCAGTTTTTAACAAGCCAGGGATTTCCATGTCCAGAAATTTATCCCGCTAAACAAACCAAAGAACACATGGCCCTTGTCGAATTTAATGGCGTGAATCTAGAGAAGAACAACAATAAAACGAAAGAGCTTTGTATTGTGAGATTACTTGGCTTTCTGGAAGGCAAGATGGCCTGTTCAATCGACAGAAACCCTGAACTACTCTACACAATTGGTAGTTTTGTTGGACGTCTGAGCAATGTCTTGAAGGACTTTTCACATGAAGGAATAAAGTCAAGGACGTCACAGCCGTTCTTATGGGACATCTTGGAATTCCTTAACATTGATCGATACATCCAATGCTTCAATGACGACGACAATGATCCTGTAAGCCTGATACGTGAAGTACATGCAGCATTTGTCAACAAAGTAAAGCCTCATCTTCAAGTCTTCCGCTATGGCACCGTCCATAACGACTTGAATGGAGAAAATATACTGGTCACTGGTCCACCCTACGTAGTGAGTGGTGTGGTTGATTTTGGCGACATGATCGAATCACTCATTATTGGTGAACTCTCTAACGCGATGGTCTTTGTTATGGAAGGTGACCGCGGTATAGAATTCAGCGGTTATCTTCTATCTGGTTATCAGAGTATTTTTCCTATGCCAGTACAAGAGCGCGTACTACTTTATTACCTTATTGCGGCTCGTCTTTGCCAGCTTGTGGTGTATTCTAAGGGTAATCTGGTAGAACATCCCCACCACGTGGACGTTCAAGTTTGTTATAACAAGTATTATGGCATTTTGAGGCAATTTTGGTCTAAAACAATAGACGAAGTTGAACGCATTTGGAGTGAATCTGCTAAATAATTTGTCCTTTACTTCTCACGTATCGTTCATGTATAGAAAATCAGGACATTCAGTCTGCGCATGCTCCACAAATGCGCCTGCAGTACTTAAGCGGCATTGCCCTATTTAGATAGGAATCGGGGAAACACACAAAGTGAAGAGGTTTGTTTACTTTATAAATTAAGCTTTTATAGGTTTGTTTTTGTTCCGATTGCGAACCCTTTTTGTTGGTGGCAACGTATTGCCTTCATTTATCGTATAAGGTGAGATATAATACATTCTTAGCTCAAAAGTTACTACGTTTAGCCCTCGAAAGCTGGAAGTCGACTTTTTGAGCTATCGCTGGTCATTGTAGTACTTACTCATTATTATATGGCAGTCCGGTCCGGGTGAAAATGGAGCAATCTGATTGGTTCTCGGAACGGTCGGAATCCTACAGTCCGGACCGGCTTTCCGGACCGGTCGCCAGAAGTCGCCTAAAGTTTGTTTTTTAGCAATGTTGGAGATTACAAAAAATACTAAACAAATTAAAGCATTCGTAAAAAACTAATCCGTGTTTTTTCCTCAAAGAACGACATAGTTTTAAATTAAAAACAACTAGTAGAATGAGAAAAAAACTTGTACAAATGAGGCTTTACACTCACAGTTTTCCAAGTAGCTGACAACGTGGCGCCGCTTCAGTCCAGCATTCTTCATGAATTCAGCATAAAACTCCAAGTATTTTACTGTCATTCGTTGCAGGCCATTATAATTTCCAAATCCTTGATGGCTCATTTATCAAAAGTTCGCTAAAATGATTCAGTCTTTGATGCTGTCATCCAAGTCGTGAAATCGTTGACATGAGTTTTTTGTCCAAAACTTGATTTCATATGTTTTCAAATGTTTTCCTGTATACTGGGAGATTGTTGTCTTCATAATCAAAGAATTTTAAAGTGCACAAATCCATTTTGTCGAGGATTTTCGATGAAAACAAAGACATTGAAGTCGACTAGGTTCTTGTTCAGTTTTCAATCGACTGCAAATTTTGCATAAATGGCGGTAAAAAAAAGGCGGCAAAATTGTGGCGCGCGCGCGAACATTCTCAATTTCTCATAAATATCAAAAACAATTAAAAAATATTGGTCAGCCATATAACAAATAAGTTATTGACCGAGCTTGTTCGGTCCGGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A8WFT6	Hydroxylysine kinase OS=Danio rerio OX=7955 GN=hykk PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001042 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01636 all species →	APH	Phosphotransferase enzyme family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050249 all species →	Family	Pseudomonas-type Homoserine Kinase	Interproscan
IPR002575 all species →	Domain	Aminoglycoside phosphotransferase	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21064 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0019202 all species →	Molecular Function	amino acid kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K18201	AGPHD1; hydroxylysine kinase	EC:2.7.1.81	Lysine degradation	ko00310	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.