Detailed information of gene23887.t1 in Actinoscyphia liui

Genomic Location: chr7:4522171...4535586
NR annotation: XP_020895411.1, gametocyte-specific factor 1 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q3SZU0Gametocyte-specific factor 1 OS=Bos taurus OX=9913 GN=GTSF1 PE=2 SV=1
Q8WW33Gametocyte-specific factor 1 OS=Homo sapiens OX=9606 GN=GTSF1 PE=1 SV=2
Q4R8M9Gametocyte-specific factor 1 OS=Macaca fascicularis OX=9541 GN=GTSF1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006048 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05253
all species →		zf-U11-48KU11-48K-like CHHC zinc fingerDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051591
all species →		FamilyUPF0224 (FAM112) RNA ProcessingInterproscan
IPR022776
all species →		DomainTRM13/UPF0224 family, U11-48K-like CHHC zinc finger domainInterproscan
IPR036236
all species →		Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21402
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for gene23887.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene23887.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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