Detailed information of gene23893.t2 in Actinoscyphia liui

Genomic Location: chr7:4572199...4580757
NR annotation: XP_029195403.2, uncharacterized protein K02A2.6-like [Acropora millepora]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P03360Gag-Pol polyprotein (Fragment) OS=Avian reticuloendotheliosis virus OX=11636 GN=pol PE=1 SV=2
Q3ULM6SUMO-specific isopeptidase USPL1 OS=Mus musculus OX=10090 GN=Uspl1 PE=2 SV=2
Q6DRC5SUMO-specific isopeptidase USPL1 OS=Danio rerio OX=7955 GN=uspl1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF15499Peptidase_C98Ubiquitin-specific peptidase-like, SUMO isopeptidaseFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR028890DomainUbiquitin-specific peptidase-like, SUMO isopeptidaseInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0032183Molecular FunctionSUMO bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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