Gene detail

Detailed information of gene23923.t1 in Actinoscyphia liui

Genomic Location: chr7:5022883...5028237
NR annotation: XP_020895454.1, uncharacterized protein LOC110234416 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene23923.t1

ATGACGGGAAACAGCTCTACTGAGCCATGTGCCAAGAAATCCAAACTTGACAACTTCGATCTGAGCAGTGATGAGGACGATGATGATCTTCTTGTGTCTATATGGGACACAAAGCCTTCATATAAACGCTCACATCAATCAGATCAATCAAATGATGAAAAGGAATGTCAGAGAAGAACGAGTAATACAGTAATACCTTCATCTTCTGGGCTAAATTCACAAAGAACAACTCACACCTCTACTGGCCATTTTGAGACGTCCGGAGTAGCTAACCTCAAAGCCATGTTCCCTTCACTTGAAGAAGACGTTTTACAAACGTATCTTTCTGTCTATAACATGGAGGAGTGTATTCAAGTAATCTCGAATTTTTTATATAGAGGAGATCAAAAAGATGATGTGATTATAGTGAATTGTAGCACAGCTGAGAATGATATGCAATCAACAGCTAATTCTGGTGTGACTGCCAACTCTGACCCTACCCTACCAAGTCCTACTCAAAGCGTTCAATCTAAAGGAAAGTCTCCTAAAACACCAGCTTCAACCAATAGTTCAACTCCACAAAGTACACCAACGCATGCAAAATATTCAGCCATAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTCCTAAAACACCAGCTTCAACCAGTAGCTCAACTCCACAAAGTACACCAACGCATGCAAAATATTCGGCCAAAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTCCTAAAACACCAGCTTCAACCAGTAGCTCGACTCCACAAAGTACACCAACACATGCAAAATATTCAGCCATAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTCCTAAAACACCAGCTTCAACCAGTAGCTCGACTCCACAAAGTACACCAACGCATGCAAAATATTCAGCCATAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTTCTAAAACACCAGCTTCAACCAGTGGCTCAACTCCACACAATACACCAACGCATGCAAAACATTCGGCCAAAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTCCTAAAATACCAGCTTCAACCAGTAGCTCGACTCCACAAAGTACACCAACGCATGAAAAATACTTGATCAAAAACAATACTGATTATTCATCAAGTGCTTGTTCTACTAAAGGAAAGTCTCCTAAAACACCAGCCTCAACCAATAGCTCGACTCCCCAAAGTACACCAATGCATGCAAAATATTCAGCCATAAACAGTAATGATTATTCTTCAAGTGCTTGTTCTACTAAAGGAAAGTCTTCTAAAACTCCAGTGTCTTTGACAAGTGATTTCGCTTCACCAAGCATGTCATCGCATACAAAAACTGTTATTGGTCTTAGTCTTACAAAAGATGGTATTGCAGCAGCAATTAACTGTGCTCTATCAGGTATTGCAGTGGCAATTAACAGTGCTTTAGCAGGTACTGAGTCTCAGACAGATTCTAAAGTTAGTCCTACAAGTGATCATGTGGACTGGGGAGGTGTTACCTATCAAAGCAACAAAGAAAGTAAATCTCTCTCCAACAAAGATGTTCAAGTCCCAACTATTAAACAATCTGAAAATACTGATACTATGAAGAAGGAAACTTCAACAAATGTGGCTGCAAAAGAGTTGAAAAGCAATGTAAAACAAGCAGTACTCGGTAAGAATGATTTGAAATACCAACATCACCAAGATGTACAAATTGCAAAGCCAAAACAATCTGGAAATACCTCATATTCTACAAGAAAAGACACTGTTTCTGACGAATTAAGAAATAAGAGGCTGCAGTACTATGGTAGAAATGATAACAAGAATGATCAAGCACCAGGAACAAAGATGTCTACCCCCACAGCCTCTAGAAATGTAGCTTCATCAAAAGGAAGATCTGGAACAGTTAATCATGACAGCTCTACATCTACTACATCTACTACAGCTGTTGGAATTGATATCCGTTGTGGGAATAAAAAAGTTCATCCTTCAATGAAAAGATGCTATGATGAATCCAAAGCAATGAAAGACATAGCAAAACGCTACAAGAAAGATTCCCATGAGAATCAAAACAATAACATGCAAAGTTCACAAGCTGCTACACCAGTCCAGAAATCACATACCACGACTGCATCAAGCTCACAAGTTCAACATCCTACAACTCCAGCAAGAACTACTCCAGCAAGAACTACTCCAGCAAGAACTACTCCAGCAAGAACTACTCCAGCAAGAACTACTCCAGCAAGATCTACTCCAGCAAGAACTACTCAAGATGCTACTTGTGCACCAACAGTCCAGAAGTCACATACCACAACTGCATCAAGTTCTCAAGCTCACCGTGCTACAACTCTAGCTAGAACTTCTTCTCTAAGTGTTCTCAGAACAGCTACTTTTACTCAAGCACTAGCCAATATAAGAAAAAGTACATGTACTACAACATCTTCTACAAATACAGTGACTGCAAGCACAACACACACCAGTCCAGCATCTTCAAGGTCAGACAGCAGTCGTGCTAGTCCTCAAATCAGTAATCGTCCTGCAGCTAGTAGCTGTTTGATGACCTGGAACTCAATTCCACCAAGTAGTATTTATACTATGGATAATGTTCCCACAACTCAAACCACGGCAAATCACAGTAATATGAATACAGTTTCATTAGCAAGTATTCAAGGTACGACATCAACTACAAGTTCTGCAACAACTGTACAAAGCATGCCATCCAATCCAAGCTTTGCCAGAACAAATCCAAGCTTCACAACAACTTGTTGGAGTTCCACAACAATATATCAGAGTTCCACAACAATTGGCCAAAATCCAGTTTCAAATCCAACCTCCTTTGTTAAAGGTAATCAGCATGGTAGTAAAGGAAAAGGTCCAATGAAGAATGGTATTACAACTAGCAACACATCACCTTCACAGCGCGACATTGCTGTTAATAGCAGCAACTTATCTGTTCCACACACAAGTCCATCAAGTGGGAATGCAATGGGAATGCCATCAGAATCAATGAACAATGGTTTTACAACCAACACATACAACAACTTATCTGTTCCATTCACCAGTCCATCAAATGGGAATGCAATGGGAATTTCATCAGTTGACGTAAACCAAGGAATTGAAAACATGAATAGTGAACTACAGAATATGCTGAAGAACATGATCACTAGAAATGAACGTTTGACTGAATTATCCAAGCAACATTTGAATGACTTCCAAGAACAACCAGCAAACGCAGGACCGACTCCTGAAGAAGAACAGTCTGCCAAAGAAATGCAAAGTTTACAAAATGAAACTGAAATACTTAGCAAGTTATTCCCAGATGTTGACCCCAATTACATATTCTATAAACTGGAGAAAATAAAAGATGATCCCAACAGAGTAACTAAAGTCAATGAACAATTAGGGCAGCAGAAGAAAGGTGTCAAAAGTGATGGTCCTGCAAAGACAACAGTGTCATGGTCATGGGAAGGGGAAGACAAGCTTCCAGGAACGTTTAACTCATTTGCGGAGGCCGAATCCAACTACATAGAGCTACATTTCAAAAGATACAAAGGACAACTTATGTATATTCACTTCTCGGAGGCCAACAGACCATTGGCCTTTGACTTTAAAGTCATGAGAATGACAGACTATGCAACTGGCAGGAGTGTACGCATCCAACGATCTGATGGAAATCAAAATATAGAAAATCAAAGTTCAGTGAGTAATGATAAGCTTCAAAGACCTGCACAGAAACCAAGAGGCCTCATTGAAGTGTTTCCAGGGACCAGCGAGTTCTGTAGAGTCGAGTCTCTGCTTAAGAAGAGTATCCAACAGGCTCACGTCACCGAGGTTAACAGGGTAGACAACAGTTGGCTCCAACAGACATATAACATGCAGTATGAACTACTCAAGCAGAAAAATGGTGCAGCCAATGTAAACATCAAAGAGTTATTCCATGGTACAAGAGAAACTGCTCCTGACGTGATTTGGGACAGTGAACATGGTTTTGACATGCGCTTCTCTGGGGAGTGTATGTGGGGGCGTGGTTGCTACTTTGCTGTCCACGCAGCCTACAGCCACGCCTATAGCTACAAAACATATAAACAACATAAAAAGTATTATCAGTTATTTCTTGCTCATGTTATTACTGGGGATTCTGCTTACCTGGAGCCAAATAGGAGTATAAAGAAACCACCGTACAACGAGCGCACTGGCCGTGATTATGATAGTATCAATGGCATCACCAAGGGTCATCCCATCTATGTGTTATATAATAATGCTATGAGCTATCCAGTTTATCTTATTACTTACACATTATAG

Transcript

gene23923.t1

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008443 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00644 all species →	PARP	Poly(ADP-ribose) polymerase catalytic domain	Family	Interproscan
PF02825 all species →	WWE	WWE domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012317 all species →	Domain	Poly(ADP-ribose) polymerase, catalytic domain	Interproscan
IPR004170 all species →	Domain	WWE domain	Interproscan
IPR051712 all species →	Family	Mono-ADP-ribosyltransferase and antiviral protein	Interproscan
IPR037197 all species →	Homologous_superfamily	WWE domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45740 all species →	POLY [ADP-RIBOSE] POLYMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003950 all species →	Molecular Function	NAD+-protein poly-ADP-ribosyltransferase activity	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0140289 all species →	Biological Process	obsolete protein mono-ADP-ribosylation	Interproscan
GO:1990404 all species →	Molecular Function	NAD+-protein ADP-ribosyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15259	PARP7S; poly [ADP-ribose] polymerase 7/11/12/13	EC:2.4.2.30	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.