Detailed information of gene24475.t2 in Actinoscyphia liui

Genomic Location: chr7:12506098...12514126
NR annotation: XP_020900486.1, arachidonate 5-lipoxygenase isoform X3 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q06327Linoleate 9S-lipoxygenase 1 OS=Arabidopsis thaliana OX=3702 GN=LOX1 PE=1 SV=1
P37831Linoleate 9S-lipoxygenase 1 OS=Solanum tuberosum OX=4113 GN=LOX1.1 PE=2 SV=1
O24379Linoleate 9S-lipoxygenase 2 OS=Solanum tuberosum OX=4113 GN=LOX1.2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001226 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00305
all species →		LipoxygenaseLipoxygenaseDomainInterproscan
PF01477
all species →		PLATPLAT/LH2 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000907
all species →		FamilyLipoxygenaseInterproscan
IPR001024
all species →		DomainPLAT/LH2 domainInterproscan
IPR013819
all species →		DomainLipoxygenase, C-terminalInterproscan
IPR036392
all species →		Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR036226
all species →		Homologous_superfamilyLipoxigenase, C-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11771
all species →		LIPOXYGENASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016702
all species →		Molecular Functionoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygenInterproscan
GO:0034440
all species →		Biological Processlipid oxidationInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K08021ALOX12B; arachidonate 12-lipoxygenase (R-type)EC:1.13.11.-
Serotonergic synapseko04726deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP