Detailed information of gene24786.t1 in Actinoscyphia liui

Genomic Location: chr7:16818309...16832616
NR annotation: XP_028513995.1, scm-like with four MBT domains protein 2 isoform X2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9JMD2Scm-like with four MBT domains protein 1 OS=Rattus norvegicus OX=10116 GN=Sfmbt1 PE=1 SV=2
Q9JMD1Scm-like with four MBT domains protein 1 OS=Mus musculus OX=10090 GN=Sfmbt1 PE=1 SV=1
Q9UHJ3Scm-like with four MBT domains protein 1 OS=Homo sapiens OX=9606 GN=SFMBT1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02820MBTmbt repeatDomainInterproscan
PF00536SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF12140SLEDSLED domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004092RepeatMbt repeatInterproscan
IPR001660DomainSterile alpha motif domainInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050548FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR038348Homologous_superfamilySLED domain superfamilyInterproscan
IPR021987DomainSLED domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0042393Molecular Functionhistone bindingInterproscan
GO:0045892Biological Processnegative regulation of DNA-templated transcriptionInterproscan

TOP