Detailed information of gene24865.t1 in Actinoscyphia liui

Genomic Location: chr7:17992235...18006812
NR annotation: XP_020903013.1, RNA-binding protein 5-B [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0JMV4RNA-binding protein 5-A OS=Xenopus laevis OX=8355 GN=rbm5-a PE=2 SV=1
Q1RMU5RNA-binding protein 5 OS=Bos taurus OX=9913 GN=RBM5 PE=2 SV=1
B2GV05RNA-binding protein 5 OS=Rattus norvegicus OX=10116 GN=Rbm5 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01585G-patchG-patch domainFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF07808RED_NRED-like protein N-terminal regionFamilyInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan
PF17780OCREOCRE domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR000467DomainG-patch domainInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR012916DomainRED-like, N-terminalInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR041591DomainOCRE domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13948RNA-BINDING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0000398Biological ProcessmRNA splicing, via spliceosomeInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13094RBM5_10; RNA-binding protein 5/10-Spliceosomeko03041deepkoala

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