Gene detail

Detailed information of gene25497.t1 in Actinoscyphia liui

Genomic Location: chr7:29485298...29548684
NR annotation: XP_028516344.1, angiopoietin-1 receptor [Exaiptasia diaphana]

Gene Structure

More details in Jbrowse

Sequence

CDS

gene25497.t1

ATGATAGTCTTGCAACACACAAGAAATGAGCGAAATCTATTTCTTGAGCCAGAGTCACCAGACCAGGTCTTAGAGATACAGTCTTTTAAGACGCAAATAAATTATCAGGATTCCAAATATGATGCAGACGTAAACACAACACAGCCAAGTTGTATTCCAGCACATTCAGCAGTAGATGCGAACCTGGAAAGACGAAAGTGCCTCCCATATCAATATTCAAAAGGCTTCTGTAAGCATATCCTTGGCAACTCGACACTTTATGCTTCGAGGGATGAACAGCAAAGTAAGGAGAAAAGCTTACAAACTTTTGATTATGGCCGAAAAATGTTAGAGTCGTATAACCTTCACGTTAGTAAAAGGTGTCTTGAAGTCTTCTTTGAGATCTACTGCCAGTGGTGGTTTCCAAAATGCGACGTGACTTCTTCAGCGGTAACAGGTAGACCACTTTGCAAAGAGGCCTGTGAGTACGCTACTACAACGTGCGCAAAAGAGCTGGAGATGGCAAAAGCATTCAATCAGCAACAGGGTTCATCTGGATATCCTATCTACTGGGTAATCATAAAATGCAAAGATTATAAGCATAGGAATGGAGGAGACACGCCAGAGTGCTACTACCCTAAGCATCTAAACACTGAAACAGACAAACTGCAAGATAAAGGATGTTACTATGGAAATGGTCTTGGTTACCGTGGCAATGTCAGTGTCACTCGTTCAGGTCATGTCTGTCAAGCATGGTCATCCCAGTGTCCTCATCGTCACAATCATCCGTTGGCAGAATATCCAGAACTCATCAATGCTTCCAATTGGTGCAGAAATCCTGGAGGCCAGGCACCCAATGGTACCTGGTGTTATACTACTAGTACTAGTACGAGATGGGAGTACTGTAATGTTAAGAAATGTCCTGCACCAGCCCCTACTCGATCTCCTGAAGTGGTGCAAGCATTCTCCGCTGGTCCTTACAAAATACTTATTGAATGGCGACCCGTTCCACTTCCATTCGTCCACGGCACTCCTCGTGGATTTCGAATCCAAATCACCAAGTTGGGTAGTAAAGATCCTATGATAAACACAACGAGTCCAGGCATCAAGTATTTTGAGATAGAAAACCTGCAACCTCTAACTGACTATATTTTGTCAGTGTTGGTATTCAACGATCATGGAGATGGTCCTTGGAGTCGTTCTGTGTATGTACAGACCATGCCACAAAATTTTGTTGCAGTGAGGCTTACGATGATTCTTCAAAACAAGAATTTCGATTCGTCCTTACTTGAGAGAAATACTACAGGATACACATCTTTGGCATCAGACATCAATTCCAAGTTCAACAAACTGTTCACAACCGCTGGTGCAGACGCGGGCTACAACATTTTCACAGTAAAAATTATTAGATTTTTCCAAGGAAGTGTTGGTGTTGAATTGGACATCACAGCTGAGTTACTCAATGCGACTTCCTGGTCAGCAACGCAAGACATAACCGGGCGAATCGTTAAAGAATCTGAAACAAGCACAGTCGAACCTACGTCTTTACGTTTTACTTCTATACTGGTGAAAGCTCCTCCTCCACCGCCTGCAAACCTGAGTCAAAGTGACGTCACTATGACGTCAGTGACTGTTCATTGGTCCGCTCCTGCTCACAACGAACCATTCAGAATCACTAACTACACCGTACAGTACAAGAAGGCAGAGACTGCAATGTCGTATTATGATGCTATGATTATAAGTTCGGATAAAAGTGAAAGTGTTGTGGAGAACTTAGATTCGAACACTAAATATCTGATGCGTGTAGTGTCTATCAACGCCTATGGAACCCAGCCCAGTGAATATATGGTTGTCGTAACTAAAGCTTCTTCCCAGAGCGGTTATACCCTCGTTGCCATAGTTACACCTATTGTTGTCATGGCCGTTATTTTGATTGGAGCAGCGATATTGTTCTGGAGATGGTGGCATAAAAAACGCCAACAAGAAATAGAACTAAATGCAAAAATCCAGAGATTAAGTGAGAACCCGTATGAATCAGCCGTGGACTGGTTCGATCTTCTTAAAATCAACGTCATTAAGAAATGGTGGGAAATACCTCGTGAAGATTTAGAACTCGAGAACGAATTAGGGTCAGGACAGTTTGGTGTTGTATTGAGAGGGGTTTTCAAGAATGGAGGAGAAAAACAAAAAACGGGGTCTTACTGTGCAGTCAAAATGCTTAAAGATAATCCAACAGAACGTGAACTGCGTGACATGTGTAACGAAATCAACATCATGTCCAAAATTGGTGATCATCCCAACATTGTCAGCCTGATTGGAGCATGTACCATTAACGGTCCTCCATTGTTGGTGGTTAAATTTGCTCAGAATGGTTGTCTTCTCAATTACATCAAGGAAAATCGTCCATTACCCGAGTATGAAAACACACCCCAGAAACCAGAGGATATGCCCAAAGTGATAACTGAGAAAGAAAGACTGAAGTTTGCCTACGAGATTGCTCAAGGGATGACACATCTAGAGAAATACAGGTATGTCCACCGCGACTTGGCAGCTCGTAACATCTTACTGGGTAGCAACATGATTGCTATGGTTGCTGACTTTGGTCTATCACGTGATGTGTATGAGGTTGGAATGTACGAAAACACCGCTGGGGGTGTTCTTCCAGTACGATGGATGGCAATAGAATCTTTACAAGACTACACGTACAACTCTGAGACTGATGTATGGTCTTACGGTGTTCTGTTGTGGGAGATTGAATCTGCAGGTATCGTTCCATATGGAGGATTGTCTGGTTTGGAAATCCTAGAGAAACTGAAACAAGGCTACAGACTGGAGAAACCAGATGACACGTCACGTGACATGTATTCCATAATGTGGAAATGTTGGAACCCAGATCCAAAGCAAAGACCAACATTCTCTGATCTGGTCTACCAAGTCGGTGGGCTTCTAGCTCTTGCTGGTGGATATGAGAAAGCTGTTATCAATGATAACCATGCTTACGACAACGTAGAGAAGATACAAGAAGGATTCAACGACGAAACAGCCATATTAGATAAAACTACTCTCCCATTGGATAACATAGCGATTGAGATGAAAGGTCTGTTGATGACCTGA

Transcript

gene25497.t1

Protein

Uniprot

Uniprot term	Description
P11362	Fibroblast growth factor receptor 1 OS=Homo sapiens OX=9606 GN=FGFR1 PE=1 SV=3
P16092	Fibroblast growth factor receptor 1 OS=Mus musculus OX=10090 GN=Fgfr1 PE=1 SV=2
Q04589	Fibroblast growth factor receptor 1 OS=Rattus norvegicus OX=10116 GN=Fgfr1 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00051	Kringle	Kringle domain	Domain	Interproscan
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF01392	Fz	Fz domain	Domain	Interproscan
PF07714	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001245	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR017441	Binding_site	Protein kinase, ATP binding site	Interproscan
IPR038178	Homologous_superfamily	Kringle superfamily	Interproscan
IPR000001	Domain	Kringle	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR000719	Domain	Protein kinase domain	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR008266	Active_site	Tyrosine-protein kinase, active site	Interproscan
IPR020067	Domain	Frizzled domain	Interproscan
IPR036790	Homologous_superfamily	Frizzled cysteine-rich domain superfamily	Interproscan
IPR050122	Family	Receptor Tyrosine Kinase	Interproscan
IPR011009	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR020635	Domain	Tyrosine-protein kinase, catalytic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24416	TYROSINE-PROTEIN KINASE RECEPTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004672	Molecular Function	protein kinase activity	Interproscan
GO:0006468	Biological Process	protein phosphorylation	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0004714	Molecular Function	transmembrane receptor protein tyrosine kinase activity	Interproscan
GO:0005887	Cellular Component	plasma membrane	Interproscan
GO:0007169	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0007275	Biological Process	multicellular organism development	Interproscan
GO:0033674	Biological Process	positive regulation of kinase activity	Interproscan
GO:0043235	Cellular Component	receptor complex	Interproscan
GO:0004713	Molecular Function	protein tyrosine kinase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K05121	TEK, TIE2, CD202; endothelial-specific receptor tyrosine kinase	EC:2.7.10.1	CD molecules	ko04090	deepkoala