Detailed information of gene26049.t1 in Actinoscyphia liui

Genomic Location: chr7:40828429...40842494
NR annotation: XP_022081801.1, tubulin alpha-1A chain-like isoform X1 [Acanthaster planci]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P02552Tubulin alpha-1A chain OS=Gallus gallus OX=9031 GN=TUBA1A PE=1 SV=2
P68362Tubulin alpha-1A chain OS=Cricetulus griseus OX=10029 GN=TUBA1A PE=2 SV=1
Q71U36Tubulin alpha-1A chain OS=Homo sapiens OX=9606 GN=TUBA1A PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000398 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03953
all species →
Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091
all species →
TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018316
all species →
DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR036525
all species →
Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR017975
all species →
Conserved_siteTubulin, conserved siteInterproscan
IPR003008
all species →
DomainTubulin/FtsZ, GTPase domainInterproscan
IPR000217
all species →
FamilyTubulinInterproscan
IPR037103
all species →
Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR023123
all species →
Homologous_superfamilyTubulin, C-terminalInterproscan
IPR002452
all species →
FamilyAlpha tubulinInterproscan
IPR008280
all species →
Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11588
all species →
TUBULINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005525
all species →
Molecular FunctionGTP bindingInterproscan
GO:0005874
all species →
Cellular ComponentmicrotubuleInterproscan
GO:0007017
all species →
Biological Processmicrotubule-based processInterproscan
GO:0000226
all species →
Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278
all species →
Biological Processmitotic cell cycleInterproscan
GO:0005200
all species →
Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K07374TUBA; tubulin alpha-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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