Gene detail

Detailed information of gene26058.t1 in Actinoscyphia liui

Genomic Location: chr7:41020027...41076769
NR annotation: XP_031571199.1, calcium-dependent secretion activator 1-like isoform X2 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene26058.t1

ATGCTTGACGATTCCTCTTCAAATGGAGAAGAGAGTGAAGATGAGCTCCAACAAGAGCTTATTAAGAACGATTCAAAGGGGGAATCGCGATCGGGAGGTTTTAATACACCAAATTCGACCCCTCAAGGCTCTTTGATTTCTGGATTGAACAACTTTTACAATCTTGCTGCAAGCCCGACCCCTTCTCTGCAGTCTTTACAGTCTGAATTACTGGAATTCCAAGAAGAAGAAGAAAGAAAGGAGATCTTACAGCTGTTTGTGTTTGTTCTGCGTTGTATTTCGTACCCGTTCAACGCCAAGCAACCGACCGATCTGGCTAGAAGGCAAGCGAAAGTCAGCAAACTACAACTTCTAACTATCAAAGAAAGATTCTGTGCATTTCTTGATGGGAATACTCGCATTAACTCCGATGAAGCGTTCTACAATGCAGTGAGAGCGTACTATGATATCTTTATTTGTAGCGAAAGGGTCTTGAAATTAGTTATCAGTGGAGGCTGTTCGGCAAATGACTTTCGCGAAGTGTTCAAGGGTATTATCGAGAAACGGGTTCGTTTCTTGCCAGAAATTCATGGTCTCAGTAAAGAGACGGTCCTGAGTGCATGGATGGCAAAGTTTGACTCGATCTATCGCGGCGAGGACGATCCTAAGAGAGGAACGTCTAGGCTCGCTGCTTCGGCTGCTTCTGAACTTATGCTATCAAAAGAACAGCTTTATGAAATGTTCCAAACGATCTTGGGAATCAAAAAGTATGAACACCAAATACTCTACAATGCTTGCCAGCTTGACAATGCAGATGAACAGGCAGCTTGCATTCGAAGAGAGCTGCAGAACAAAATGAAAAGTATAGGAGACTTAAGAAAACAACTACCACCATTTCTTCACAAAGACATGGAAAAACTATTTGTCGAAGAACAGCAAAAAGAAATCAGTAATCTTCTGCAAGCTTTAGAGAGTTTACCAGTTGCCAAGGGAGCATCGGACTCTAAATACTCACTCTACAAATACAAGAAGGCTCAGAATTCCTTATCAGTTATGGATGTTGCCGATGACACTGACCCGTCATTGTGTAAATCTGATGTTGTCTTGTCATTCACAATAGAGATTGTCATATCAGAAGCAAGAGGTCTAAAATTGCTACCAGCCAAGAGAGTTGTCTACTGTACAATGGAGGTTGAAGGTGGTGAGAAGCTACAGACAGTAGAAGCTGAGGCTACAAAACCAATTTGGGAAACGCAAGGTGATTTTACTACTTGTCATCCAAGACCTGTCATCAAGATCAAACTGTATGAAGAAAGATCAGGCGTACTGGCACTAGATGATAAAGAACTTGGACGGTTAACAATCAAGCCAAGCCCTGGTGGTTCAGATGCGTTTGAATGGCACACATTGACACACCATAAGAGCTGGACTGGACCTAAACTAGAACTAAAACTGGCTGTGAAGATGGACAAACCTTTGAACCTCAAAAAAGCAGGTATGCTGTATGCACATGGCAAGTCAGTGTGGAAGAAATGGAAGAAAAGATTTCTAGTCTTGGTCCAGGTGAGCCATTGTACATTTGCAATGTGTAGCTATGTAGAGAAGAAGTCAGAGCCTACAGACATGCTGCAAGTTGATGGTTATACTGTAGACTACTGTGACCAACCACCACAAGGTGATGAATACAACAATGCCAGGTTTTTCTTCAAGGCTGTCAAGGAAGGAGATCAGATGTTATTTGGCACTGAAGAAGAACTGGAAAGAACCCTGTGGGTGAACAAGTTGTACATGGCTACAGGCCAATCACATAAACCAGCCGCACCTAAGCTATCCATGGTAGCTACAAATGAAAACAAGACTAGTACGCTAGGGAAAGCACAAGGCGCTGCTGACAATGCCAAGAAGCTTGGTCTTGATGCTCTAATCCAAGCAACCCCTTCCTCCTTTGATCATCACTACCTGTTTGAAGTTCTACAAAGGAAGACTCTTGAACATCGCTTGAATGATTCCTACTCATGTCTGGGATGGTTTTCACCTGGCCAAGTCTTTGTTCTTGAGGAATACTGTGCTCGTTATGGTGTGCGTGGTTGTCATCGTCACCTGTGTTACCTTAGCGACTTACTAGACAGGGCGGAGTCTGGTATTATGATTGACCCCACCCTACTGCACTACAGCTTTGCATTCTGTGCCTCCCATGTCCATGGAAATAGACCTGATGGAATTGCTACAATCACAATAGAGGAGAAAGGCAAATTTGATGATATTAAAGACCGATTGTGGAACTTGCTGGCACATCAGATAGTTCATTTCAGGTATTGCTTCCCATTTGGTCGCCCAGAGGGAGCACTAAAGGCAACTTTGTCTTTGTTTGAGCGGGTAATGATGAAGGATACATCATCTCCTGTCCCTGCAGAAGAGTTTAGAAATGAGATCAGGAAATGCTTACAGCAGGCAGCACTAGTCAACTACACCAGAGTCTCAGATTATGCTCAGATAGAAGAATGTAGTACTGAAGACACTTCACCAGAACAGAGATTCGAGGGGATATTACACTTAGCAGAACTATGCATTGACCTTCTACAACAGAACGAAGAACATCATGCTGAGGCGTTTGCTTGGGTAAGCGATTTGATGATTGAACATCAAGAGATTTTCTGGTCACTGTTCTCAGTTGACATGGATGCTGCAATGGCTGTACAGCCACCTGATACTTGGGATAGTTTCCAGTTATTCCAACTCCTTAATGAGTACATCACGAGTGATCCTGCGCTGTGCCGCAAGAAGTTCCACACCCACTTACGTGAGAGCTTTGCTCCCCATGTCATACGATACATCGACCTAATGGAATCATCTATTGCACAGTCTTTGCACAAAGAGTTTGAGAAAGAAAGCTGGGAAGCTGTTGGAAATGGCTGCAACTCGTCAGAAGAATTATTTTGGAAACTAGAAGCCTTACAAAAGTTTGTGCAAGACTTGAACTGGCCTGACGAGGTCATGGAAGCACACCTGGTGAAACGACTAAAACTCATGTCATCGGATATGGTGGTGTCTTGCGTGAAAAGAACTAAAGCAAAGATTGATAATTGGCTGAGTAATACGAATGTTACCATGGAATCTGTGATACCAACTAAAGTGTTTGTTATGCTGAATGTCATTAGCCAAGCTAAGAAACAGTCTTTCACTTTGTGTACAACCGAGGAGGCCGAAGCTGAGCAGCATCGTTATCACTCGAACGTCTCGATCTTTTTAACTGATACTCAAAAGGAAATGGCCCGTAAAATTGTCACCAAGTTAAACTCCATGCTAGCATCATTGCTAGCAAAGCTTGCACGATACGATCAAGGCTCAATTCTCTCCTCTGTATACTCTGCGTTAAAGAATCCAGGTGATGAATTATATAAAGGTTTCGTCAAGTTTTTGAGGGACAATCTGAAGCAAGTAATGGAGAATGTCAAAGAGGATCAGCTAAAGAAACACATTGTTAAGTTATGGTACACTCCAATGCTGGCAACAATATGTGAATGGCTATCCCATCGACTGAGTGTCTCCTTACATCAATACCAACTCAAAACTCTTCTTCCTATTGCTAAGGAATTACCGAAGATCTTCGAGATATGCCAGATCTACGGCCTGGCCATTCCTCCCAAACGGCTCCGCTGTTCAGTATATGGTACTCTGCTGTCACGGCTACAAGTTGAAGAAGCAATGTTGAAAGGAGAACAAATCAATTGCGTGGAAGATTACACTGGTTACAAACACTCTGACGACGATTCAGACTCTAATAGCGAGGATGAGTTATAA

Transcript

gene26058.t1

CTTGACTTTCGTTCTTTAGATTGTGGTGTATTTCCTGCGTGGAAAAACAAGCAAAATATATCAAAATGCTTGACGATTCCTCTTCAAATGGAGAAGAGAGTGAAGATGAGCTCCAACAAGAGCTTATTAAGAACGATTCAAAGGGGGAATCGCGATCGGGAGGTTTTAATACACCAAATTCGACCCCTCAAGGCTCTTTGATTTCTGGATTGAACAACTTTTACAATCTTGCTGCAAGCCCGACCCCTTCTCTGCAGTCTTTACAGTCTGAATTACTGGAATTCCAAGAAGAAGAAGAAAGAAAGGAGATCTTACAGCTGTTTGTGTTTGTTCTGCGTTGTATTTCGTACCCGTTCAACGCCAAGCAACCGACCGATCTGGCTAGAAGGCAAGCGAAAGTCAGCAAACTACAACTTCTAACTATCAAAGAAAGATTCTGTGCATTTCTTGATGGGAATACTCGCATTAACTCCGATGAAGCGTTCTACAATGCAGTGAGAGCGTACTATGATATCTTTATTTGTAGCGAAAGGGTCTTGAAATTAGTTATCAGTGGAGGCTGTTCGGCAAATGACTTTCGCGAAGTGTTCAAGGGTATTATCGAGAAACGGGTTCGTTTCTTGCCAGAAATTCATGGTCTCAGTAAAGAGACGGTCCTGAGTGCATGGATGGCAAAGTTTGACTCGATCTATCGCGGCGAGGACGATCCTAAGAGAGGAACGTCTAGGCTCGCTGCTTCGGCTGCTTCTGAACTTATGCTATCAAAAGAACAGCTTTATGAAATGTTCCAAACGATCTTGGGAATCAAAAAGTATGAACACCAAATACTCTACAATGCTTGCCAGCTTGACAATGCAGATGAACAGGCAGCTTGCATTCGAAGAGAGCTGCAGAACAAAATGAAAAGTATAGGAGACTTAAGAAAACAACTACCACCATTTCTTCACAAAGACATGGAAAAACTATTTGTCGAAGAACAGCAAAAAGAAATCAGTAATCTTCTGCAAGCTTTAGAGAGTTTACCAGTTGCCAAGGGAGCATCGGACTCTAAATACTCACTCTACAAATACAAGAAGGCTCAGAATTCCTTATCAGTTATGGATGTTGCCGATGACACTGACCCGTCATTGTGTAAATCTGATGTTGTCTTGTCATTCACAATAGAGATTGTCATATCAGAAGCAAGAGGTCTAAAATTGCTACCAGCCAAGAGAGTTGTCTACTGTACAATGGAGGTTGAAGGTGGTGAGAAGCTACAGACAGTAGAAGCTGAGGCTACAAAACCAATTTGGGAAACGCAAGGTGATTTTACTACTTGTCATCCAAGACCTGTCATCAAGATCAAACTGTATGAAGAAAGATCAGGCGTACTGGCACTAGATGATAAAGAACTTGGACGGTTAACAATCAAGCCAAGCCCTGGTGGTTCAGATGCGTTTGAATGGCACACATTGACACACCATAAGAGCTGGACTGGACCTAAACTAGAACTAAAACTGGCTGTGAAGATGGACAAACCTTTGAACCTCAAAAAAGCAGGTATGCTGTATGCACATGGCAAGTCAGTGTGGAAGAAATGGAAGAAAAGATTTCTAGTCTTGGTCCAGGTGAGCCATTGTACATTTGCAATGTGTAGCTATGTAGAGAAGAAGTCAGAGCCTACAGACATGCTGCAAGTTGATGGTTATACTGTAGACTACTGTGACCAACCACCACAAGGTGATGAATACAACAATGCCAGGTTTTTCTTCAAGGCTGTCAAGGAAGGAGATCAGATGTTATTTGGCACTGAAGAAGAACTGGAAAGAACCCTGTGGGTGAACAAGTTGTACATGGCTACAGGCCAATCACATAAACCAGCCGCACCTAAGCTATCCATGGTAGCTACAAATGAAAACAAGACTAGTACGCTAGGGAAAGCACAAGGCGCTGCTGACAATGCCAAGAAGCTTGGTCTTGATGCTCTAATCCAAGCAACCCCTTCCTCCTTTGATCATCACTACCTGTTTGAAGTTCTACAAAGGAAGACTCTTGAACATCGCTTGAATGATTCCTACTCATGTCTGGGATGGTTTTCACCTGGCCAAGTCTTTGTTCTTGAGGAATACTGTGCTCGTTATGGTGTGCGTGGTTGTCATCGTCACCTGTGTTACCTTAGCGACTTACTAGACAGGGCGGAGTCTGGTATTATGATTGACCCCACCCTACTGCACTACAGCTTTGCATTCTGTGCCTCCCATGTCCATGGAAATAGACCTGATGGAATTGCTACAATCACAATAGAGGAGAAAGGCAAATTTGATGATATTAAAGACCGATTGTGGAACTTGCTGGCACATCAGATAGTTCATTTCAGGTATTGCTTCCCATTTGGTCGCCCAGAGGGAGCACTAAAGGCAACTTTGTCTTTGTTTGAGCGGGTAATGATGAAGGATACATCATCTCCTGTCCCTGCAGAAGAGTTTAGAAATGAGATCAGGAAATGCTTACAGCAGGCAGCACTAGTCAACTACACCAGAGTCTCAGATTATGCTCAGATAGAAGAATGTAGTACTGAAGACACTTCACCAGAACAGAGATTCGAGGGGATATTACACTTAGCAGAACTATGCATTGACCTTCTACAACAGAACGAAGAACATCATGCTGAGGCGTTTGCTTGGGTAAGCGATTTGATGATTGAACATCAAGAGATTTTCTGGTCACTGTTCTCAGTTGACATGGATGCTGCAATGGCTGTACAGCCACCTGATACTTGGGATAGTTTCCAGTTATTCCAACTCCTTAATGAGTACATCACGAGTGATCCTGCGCTGTGCCGCAAGAAGTTCCACACCCACTTACGTGAGAGCTTTGCTCCCCATGTCATACGATACATCGACCTAATGGAATCATCTATTGCACAGTCTTTGCACAAAGAGTTTGAGAAAGAAAGCTGGGAAGCTGTTGGAAATGGCTGCAACTCGTCAGAAGAATTATTTTGGAAACTAGAAGCCTTACAAAAGTTTGTGCAAGACTTGAACTGGCCTGACGAGGTCATGGAAGCACACCTGGTGAAACGACTAAAACTCATGTCATCGGATATGGTGGTGTCTTGCGTGAAAAGAACTAAAGCAAAGATTGATAATTGGCTGAGTAATACGAATGTTACCATGGAATCTGTGATACCAACTAAAGTGTTTGTTATGCTGAATGTCATTAGCCAAGCTAAGAAACAGTCTTTCACTTTGTGTACAACCGAGGAGGCCGAAGCTGAGCAGCATCGTTATCACTCGAACGTCTCGATCTTTTTAACTGATACTCAAAAGGAAATGGCCCGTAAAATTGTCACCAAGTTAAACTCCATGCTAGCATCATTGCTAGCAAAGCTTGCACGATACGATCAAGGCTCAATTCTCTCCTCTGTATACTCTGCGTTAAAGAATCCAGGTGATGAATTATATAAAGGTTTCGTCAAGTTTTTGAGGGACAATCTGAAGCAAGTAATGGAGAATGTCAAAGAGGATCAGCTAAAGAAACACATTGTTAAGTTATGGTACACTCCAATGCTGGCAACAATATGTGAATGGCTATCCCATCGACTGAGTGTCTCCTTACATCAATACCAACTCAAAACTCTTCTTCCTATTGCTAAGGAATTACCGAAGATCTTCGAGATATGCCAGATCTACGGCCTGGCCATTCCTCCCAAACGGCTCCGCTGTTCAGTATATGGTACTCTGCTGTCACGGCTACAAGTTGAAGAAGCAATGTTGAAAGGAGAACAAATCAATTGCGTGGAAGATTACACTGGTTACAAACACTCTGACGACGATTCAGACTCTAATAGCGAGGATGAGTTATAACCAGATTGTGTCACGGGGGCGTAACCAGAGGGGGGTGCTTGTGACCCCCATTCCTTCTAGTAGGTGTGAAATAACGGAACCTCAAAGAATAAGGAATCAGTGAGAGCTATAGATTATTGAGAGATGGTGAGGAGTGTACAATAAAACTCTTTGTAAGATAGACACCCAGGGTATCATCACTGGCTTGCTGTTTTACACCGGTATACGTTTATAATGTAAATTATGAGAGACACCTTGGGGACCGGCATTCTGCCAATCTTAGAGAGATACATATACGTTTATAGAGAATAAAATTTATACAGTAAAATGACTTAGAAGAAGTTCAAGTTTTATAGAATTTATGTACATTGAAATGCCTGGGAACTGCTTGGCAGGGACCATCTTATAAAGTAGTCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGAGGTACCCATCATAGAGGGGTGTCTGTCTTATAGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q62717	Calcium-dependent secretion activator 1 OS=Rattus norvegicus OX=10116 GN=Cadps PE=1 SV=1
Q6GLR7	Calcium-dependent secretion activator 1 OS=Xenopus laevis OX=8355 GN=cadps PE=2 SV=1
Q8BYR5	Calcium-dependent secretion activator 2 OS=Mus musculus OX=10090 GN=Cadps2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003049 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00169 all species →	PH	PH domain	Domain	Interproscan
PF06292 all species →	MUN	MUN domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan
IPR000008 all species →	Domain	C2 domain	Interproscan
IPR014770 all species →	Domain	Munc13 homology 1	Interproscan
IPR033227 all species →	Family	Calcium-dependent secretion activator	Interproscan
IPR011993 all species →	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR010439 all species →	Domain	MUN domain	Interproscan
IPR035892 all species →	Homologous_superfamily	C2 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12166 all species →	CALCIUM-DEPENDENT SECRETION ACTIVATOR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006887 all species →	Biological Process	exocytosis	Interproscan
GO:0016079 all species →	Biological Process	synaptic vesicle exocytosis	Interproscan
GO:1990504 all species →	Biological Process	dense core granule exocytosis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K19933	CADPS; calcium-dependent secretion activator	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.