Detailed information of gene26366.t1 in Actinoscyphia liui

Genomic Location: chr8:2470480...2491247
NR annotation: XP_048252587.1, uncharacterized protein K02A2.6-like [Haliotis rufescens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O93209Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1
P08361Gag-Pol polyprotein OS=Cas-Br-E murine leukemia virus OX=11792 GN=gag-pol PE=3 SV=2
Q8HXX6Ganglioside GM2 activator OS=Macaca fascicularis OX=9541 GN=GM2A PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02140Gal_LectinGalactose binding lectin domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF02221E1_DerP2_DerF2ML domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR000922DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036846Homologous_superfamilyGM2-AP, lipid-recognition domain superfamilyInterproscan
IPR043159Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR003172DomainMD-2-related lipid-recognition domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0030246Molecular Functioncarbohydrate bindingInterproscan

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