Gene detail

Detailed information of gene26573.t1 in Actinoscyphia liui

Genomic Location: chr8:6650961...6657904
NR annotation: KXJ10210.1, Ornithine decarboxylase [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P27121	Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=spe-1 PE=2 SV=1
B8NHE2	Decarboxylase flvG OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=flvG PE=1 SV=1
Q9UQW9	Ornithine decarboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spe1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02784	Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022653	Binding_site	Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site	Interproscan
IPR002433	Family	Ornithine decarboxylase	Interproscan
IPR009006	Homologous_superfamily	Alanine racemase/group IV decarboxylase, C-terminal	Interproscan
IPR000183	Family	Ornithine/DAP/Arg decarboxylase	Interproscan
IPR022644	Domain	Orn/DAP/Arg decarboxylase 2, N-terminal	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006596	Biological Process	polyamine biosynthetic process	Interproscan
GO:0004586	Molecular Function	ornithine decarboxylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0033387	Biological Process	putrescine biosynthetic process from ornithine	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan