Gene detail

Detailed information of gene26934.t2 in Actinoscyphia liui

Genomic Location: chr8:14612391...14628449
NR annotation: PFX15414.1, hypothetical protein AWC38_SpisGene20370 [Stylophora pistillata]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene26934.t2

ATGCCAAAGTCTAAAGGTAAAAAGAAAGCAGCAATCAAGGTCCATGATGACGATAAACAACCAAGCTTTATTATCGACAGTCACTGCCTGAAGGAGTTAACACAAGTAGGGACAGGGTTTTACTCTACTGTCAAAGTTGGCGAATGGACACGCACTAATGATAACAAGATTTGCCCTTCAGGTTATGAGTGTTATAGAAAGGATAGAAATCGTAATGGTGGTGGCTGCGCAGTGTTCGTCAAAAGCAAATGGCCAAGCAAACGGAGGACTGATTTGGAACCGGATTGTTTAGAAATGGTATGTGTAGAGATTTGTCCCGATAAAGCCAAGAACACTTTATTTGCTGTAATCTATAAACCACCAAATATGGATTCTGACAAATTTATGACTGGCTTTGACTTGGATTTTCTTAATAAACTCGACGATGAATTGGGAAAAGATATAATAATCACAGGAGATTTCAACGCAGACGTTATTGCTTCAAAACTATGTAAATATACAAGAAAATTAATGCAAACTACCCGGCTTCATGGCCTGAATCAGTTAATAAAAGATCCAACTCGCGTAACTGAACATTCCAGTACTGCAATTGATCTCGTGTTTGTCAATAATTGTCATCGCATTGTTTCGCATGGGGTGCAAGAATTTGGAGCTAGCGATCACTCTATTGTTTTTGCTATCAAGAAGGCTGGAATTTGCAAAGCTCCTGCCGAACTGCGTGAAGTAAGATCTTTTAAGAACTACAATAGCAAACATTTCCAAAAAGACATTGCGAGCATTCCTTGGAGTATTATCGAGTCTTTTGATGATATTAATGACGCTGTGGCTGCCTGGAATAGTCTATTTATTGATGTTGCAAATCGTCACGCTCCTTTAAAGACTATAAGAATAAAAGGATCAATTAAACCTTGGATCGCCAAGGAACTTAAAGAGCTAATGATTGATAGGGACTATGCGTTAAAGGTTGCAAAACGATCTGGCACTCAAGAACATTGGAATAATTATCGTACATTAAAGAATTTTGTTAACAGACAGATAAAATCAGCAGAAGCGTCACATTATAAAAAATTGATTGACTCAGCTGAAAATCCAAAACAGTTATGGCAATCGTTGAATTCTGTCATTGGTCGTAAGAAGGCTGGGAGCTCGACACTTCACGTTAAGGATGGTAAACATCTTTTGTTTGATCCAAAGAAAATTGCGACAAAGTTTAATAACTTTTTTGCATCCATCGGCTGTAAAGTTGCTGATGATGCTGTCTTAGTCTGTGCCGCATCAACGCCCAAAGAGCTGAAAGAGATGTTGGAGTACGACTTTACTCAGATATGCAATTGGTACTGTGACAATAGACTGACTTTAAATGCCAACAAAACCAAACTGATGTTGGCTGGCAGCAAAACTACGTTGGGATTATTTGACGATTTTGAGCTACAATCAGAAGCAGAGTTGACGACCGCGTTTACGGCCACTTCTTCAACGGCCACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACTTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTAAAATTGTGGCCATCAAATGTCTCAAGGAAGCCGTCCTTGAAGGTCATTTACAGGAAGTTCTGAATAACGTGGCGACCTTGGAGCACAAGAACATCATCAAGCTGTATGGAATATGTTTAGCAGGAAAAAATCACCCGTTAAGACTGGTAACCGAGTACGCTTCCAATTTTTCTCTTCGAGATGCGATGAGAAACGAAAGAAAGAGGGGCTTCTTCTGCCAGGTGACGCATCTGAAAATGTTTGCAGGACAGGTTGCACAGGGAATGGCCTACCTTGGGGAGAAAAACCTGGTGCATTGTGGGCTTGCTGCACGAAACGTGTTGGTGGTAGAACCTGATTTGGTACAAATTAGTGATGTAGGGCTAGATAGGGCACTTCGCCAAGGACGACGTAAAGCAACAGACAGACCGCTCTCTGATACACCGTGCATGCTGTGGTACGCTCCTGAGGTTCTTGAGGGACAGACCTTCACACACAAAGCAGACGTTTATAGTTATGGTGGGTTATTGTGGGAAATGCTGACATTTGGTGACGAGCCTTGGAAAGTAAAAAGCGATAATTTCCTGCCAGAAGAAAGGCTTCCTCAGCCTAAAGCATGTCCAACCGAAATGTATGAACTTATGAAATTATGCTGGACTGAAAGACCAGACGATAGACCAGGATTTGACGAGATAATCAGGACACTTCAAGAGATTGACCTCCCCGTAGGAACGGCTACAAAGATTGTCCTAAGGTCTAGTTGTCCTGAGGATTACATTTTGTCGTTCAAACGAGGAAGCAAAATTACAATCATACGAAGGTTGGATGGTAATCAATGCCGTGGACAAAACGAGAATGCTGACATAGGGCTGGTACCTATTGACGTCGTTGACTTAAACATTAAACCTCAAGAAAGGTCAGTAGACGACTTTGACCTCCAAATCGGCGAGCCCTTCAATTTCAAGCACAAGGGACCAGACAAAATTATTGGGGAATGGACAAGTGCTGGCCTTCTCGTGTCCCCTAGGGGTCAATTTCCAAGCCTTAATTACCAAAGACCTAGTGATACCGCAGACGATAATGAAAGTGGTAAAGCTTGA

Transcript

gene26934.t2

AAATGATGTGACTGTTTATTATGAATATGGCACGGGGATTTCCCAGCTTTTATGAGCGTTTCCTTTCACTTTCTTGTCTTAAAAACCTTGATTGAAATTGCAAGTTCTAAGTCTAGAATTCTTAGTTGGTTTTACTCGATATCCAGCCGAAAATATCGCCGAGGCTCGATCGAGTTACAACTATAAGCGATTCCCTTTCGGACCAAATATTAATATGCCAAAGTCTAAAGGTAAAAAGAAAGCAGCAATCAAGGTCCATGATGACGATAAACAACCAAGCTTTATTATCGACAGTCACTGCCTGAAGGAGTTAACACAAGTAGGGACAGGGTTTTACTCTACTGTCAAAGTTGGCGAATGGACACGCACTAATGATAACAAGATTTGCCCTTCAGGTTATGAGTGTTATAGAAAGGATAGAAATCGTAATGGTGGTGGCTGCGCAGTGTTCGTCAAAAGCAAATGGCCAAGCAAACGGAGGACTGATTTGGAACCGGATTGTTTAGAAATGGTATGTGTAGAGATTTGTCCCGATAAAGCCAAGAACACTTTATTTGCTGTAATCTATAAACCACCAAATATGGATTCTGACAAATTTATGACTGGCTTTGACTTGGATTTTCTTAATAAACTCGACGATGAATTGGGAAAAGATATAATAATCACAGGAGATTTCAACGCAGACGTTATTGCTTCAAAACTATGTAAATATACAAGAAAATTAATGCAAACTACCCGGCTTCATGGCCTGAATCAGTTAATAAAAGATCCAACTCGCGTAACTGAACATTCCAGTACTGCAATTGATCTCGTGTTTGTCAATAATTGTCATCGCATTGTTTCGCATGGGGTGCAAGAATTTGGAGCTAGCGATCACTCTATTGTTTTTGCTATCAAGAAGGCTGGAATTTGCAAAGCTCCTGCCGAACTGCGTGAAGTAAGATCTTTTAAGAACTACAATAGCAAACATTTCCAAAAAGACATTGCGAGCATTCCTTGGAGTATTATCGAGTCTTTTGATGATATTAATGACGCTGTGGCTGCCTGGAATAGTCTATTTATTGATGTTGCAAATCGTCACGCTCCTTTAAAGACTATAAGAATAAAAGGATCAATTAAACCTTGGATCGCCAAGGAACTTAAAGAGCTAATGATTGATAGGGACTATGCGTTAAAGGTTGCAAAACGATCTGGCACTCAAGAACATTGGAATAATTATCGTACATTAAAGAATTTTGTTAACAGACAGATAAAATCAGCAGAAGCGTCACATTATAAAAAATTGATTGACTCAGCTGAAAATCCAAAACAGTTATGGCAATCGTTGAATTCTGTCATTGGTCGTAAGAAGGCTGGGAGCTCGACACTTCACGTTAAGGATGGTAAACATCTTTTGTTTGATCCAAAGAAAATTGCGACAAAGTTTAATAACTTTTTTGCATCCATCGGCTGTAAAGTTGCTGATGATGCTGTCTTAGTCTGTGCCGCATCAACGCCCAAAGAGCTGAAAGAGATGTTGGAGTACGACTTTACTCAGATATGCAATTGGTACTGTGACAATAGACTGACTTTAAATGCCAACAAAACCAAACTGATGTTGGCTGGCAGCAAAACTACGTTGGGATTATTTGACGATTTTGAGCTACAATCAGAAGCAGAGTTGACGACCGCGTTTACGGCCACTTCTTCAACGGCCACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACTTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTGTCTACCTAAAATTGTGGCCATCAAATGTCTCAAGGAAGCCGTCCTTGAAGGTCATTTACAGGAAGTTCTGAATAACGTGGCGACCTTGGAGCACAAGAACATCATCAAGCTGTATGGAATATGTTTAGCAGGAAAAAATCACCCGTTAAGACTGGTAACCGAGTACGCTTCCAATTTTTCTCTTCGAGATGCGATGAGAAACGAAAGAAAGAGGGGCTTCTTCTGCCAGGTGACGCATCTGAAAATGTTTGCAGGACAGGTTGCACAGGGAATGGCCTACCTTGGGGAGAAAAACCTGGTGCATTGTGGGCTTGCTGCACGAAACGTGTTGGTGGTAGAACCTGATTTGGTACAAATTAGTGATGTAGGGCTAGATAGGGCACTTCGCCAAGGACGACGTAAAGCAACAGACAGACCGCTCTCTGATACACCGTGCATGCTGTGGTACGCTCCTGAGGTTCTTGAGGGACAGACCTTCACACACAAAGCAGACGTTTATAGTTATGGTGGGTTATTGTGGGAAATGCTGACATTTGGTGACGAGCCTTGGAAAGTAAAAAGCGATAATTTCCTGCCAGAAGAAAGGCTTCCTCAGCCTAAAGCATGTCCAACCGAAATGTATGAACTTATGAAATTATGCTGGACTGAAAGACCAGACGATAGACCAGGATTTGACGAGATAATCAGGACACTTCAAGAGATTGACCTCCCCGTAGGAACGGCTACAAAGATTGTCCTAAGGTCTAGTTGTCCTGAGGATTACATTTTGTCGTTCAAACGAGGAAGCAAAATTACAATCATACGAAGGTTGGATGGTAATCAATGCCGTGGACAAAACGAGAATGCTGACATAGGGCTGGTACCTATTGACGTCGTTGACTTAAACATTAAACCTCAAGAAAGGTCAGTAGACGACTTTGACCTCCAAATCGGCGAGCCCTTCAATTTCAAGCACAAGGGACCAGACAAAATTATTGGGGAATGGACAAGTGCTGGCCTTCTCGTGTCCCCTAGGGGTCAATTTCCAAGCCTTAATTACCAAAGACCTAGTGATACCGCAGACGATAATGAAAGTGGTAAAGCTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O54967	Activated CDC42 kinase 1 OS=Mus musculus OX=10090 GN=Tnk2 PE=1 SV=2
Q07912	Activated CDC42 kinase 1 OS=Homo sapiens OX=9606 GN=TNK2 PE=1 SV=3
Q5U2X5	Activated CDC42 kinase 1 OS=Rattus norvegicus OX=10116 GN=Tnk2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000001 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF07714 all species →	PK_Tyr_Ser-Thr	Protein tyrosine and serine/threonine kinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR001245 all species →	Domain	Serine-threonine/tyrosine-protein kinase, catalytic domain	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR050198 all species →	Family	Non-receptor tyrosine kinases involved in cell signaling	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24418 all species →	TYROSINE-PROTEIN KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0004713 all species →	Molecular Function	protein tyrosine kinase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene26934.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.