Detailed information of gene27031.t1 in Actinoscyphia liui

Genomic Location: chr8:16495512...16512152
NR annotation: XP_020897256.1, integrator complex subunit 11 isoform X1 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5ZIH0Integrator complex subunit 11 OS=Gallus gallus OX=9031 GN=INTS11 PE=2 SV=1
Q503E1Integrator complex subunit 11 OS=Danio rerio OX=7955 GN=cpsf3l PE=2 SV=1
Q9CWS4Integrator complex subunit 11 OS=Mus musculus OX=10090 GN=Ints11 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001366 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10996
all species →		Beta-CaspBeta-Casp domainDomainInterproscan
PF21386
all species →		IntS11_CIntegrator IntS11, C-terminal domainDomainInterproscan
PF07521
all species →		RMMBLZn-dependent metallo-hydrolase RNA specificity domainMotifInterproscan
PF16661
all species →		Lactamase_B_6Metallo-beta-lactamase superfamily domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036866
all species →		Homologous_superfamilyRibonuclease Z/Hydroxyacylglutathione hydrolase-likeInterproscan
IPR050698
all species →		FamilyRNA Processing Metallo-Beta-Lactamase Domain-Containing ProteinInterproscan
IPR022712
all species →		DomainBeta-Casp domainInterproscan
IPR001279
all species →		DomainMetallo-beta-lactamaseInterproscan
IPR048662
all species →		DomainIntegrator complex subunit 11, C-terminal domainInterproscan
IPR011108
all species →		DomainZn-dependent metallo-hydrolase, RNA specificity domainInterproscan
IPR041897
all species →		DomainIntegrator complex subunit 11, MBL-foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11203
all species →		CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004521
all species →		Molecular FunctionRNA endonuclease activityInterproscan
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016180
all species →		Biological ProcesssnRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K13148CPSF3L, INTS11; integrator complex subunit 11EC:3.1.27.-
Spliceosomeko03041deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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