Detailed information of gene27112.t1 in Actinoscyphia liui

Genomic Location: chr8:18004229...18007482
NR annotation: XP_020916925.1, ankyrin repeat and SOCS box protein 13-like [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96DX5Ankyrin repeat and SOCS box protein 9 OS=Homo sapiens OX=9606 GN=ASB9 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008870 (this species only)
Ubiquitin familyE3|E3 adaptor Cullin RING|SOCS · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12796
all species →
Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF13637
all species →
Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF07525
all species →
SOCS_boxSOCS boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110
all species →
RepeatAnkyrin repeatInterproscan
IPR036770
all species →
Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR001496
all species →
DomainSOCS box domainInterproscan
IPR036036
all species →
Homologous_superfamilySOCS box-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24161
all species →
ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0035556
all species →
Biological Processintracellular signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10335ASB13; ankyrin repeat and SOCS box protein 13-Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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