Detailed information of gene27188.t2 in Actinoscyphia liui

Genomic Location: chr8:19248323...19257093
NR annotation: KXJ12662.1, Polyhomeotic-like protein 2 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P39769Polyhomeotic-proximal chromatin protein OS=Drosophila melanogaster OX=7227 GN=ph-p PE=1 SV=2
Q8QHL5Polyhomeotic-like protein 2 OS=Danio rerio OX=7955 GN=phc2 PE=2 SV=1
Q9QWH1Polyhomeotic-like protein 2 OS=Mus musculus OX=10090 GN=Phc2 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002844 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536
all species →
SAM_1SAM domain (Sterile alpha motif)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001660
all species →
DomainSterile alpha motif domainInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR050548
all species →
FamilyPolycomb group and chromatin remodeling factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247
all species →
POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003682
all species →
Molecular Functionchromatin bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0035102
all species →
Cellular ComponentPRC1 complexInterproscan
GO:0042393
all species →
Molecular Functionhistone bindingInterproscan
GO:0045892
all species →
Biological Processnegative regulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene27188.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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