Detailed information of gene27253.t2 in Actinoscyphia liui

Genomic Location: chr8:20129123...20139894
NR annotation: RUA06620.1, hypothetical protein DSY43_01660 [Gammaproteobacteria bacterium]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P19623Spermidine synthase OS=Homo sapiens OX=9606 GN=SRM PE=1 SV=1
Q64674Spermidine synthase OS=Mus musculus OX=10090 GN=Srm PE=1 SV=1
Q9Y8H7Spermidine synthase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=spe-3 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009574 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01564
all species →
Spermine_synthSpermine/spermidine synthase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029063
all species →
Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR001045
all species →
FamilySpermidine/spermine synthasesInterproscan
IPR013087
all species →
DomainZinc finger C2H2-typeInterproscan
IPR030374
all species →
DomainPolyamine biosynthesis domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11558
all species →
SPERMIDINE/SPERMINE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene27253.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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