Detailed information of gene27283.t1 in Actinoscyphia liui

Genomic Location: chr8:20662858...20667498
NR annotation: XP_020897172.1, 45 kDa calcium-binding protein isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7ZUC245 kDa calcium-binding protein OS=Danio rerio OX=7955 GN=sdf4 PE=2 SV=1
Q5BKL945 kDa calcium-binding protein OS=Xenopus tropicalis OX=8364 GN=sdf4 PE=2 SV=1
Q91ZS345 kDa calcium-binding protein OS=Rattus norvegicus OX=10116 GN=Sdf4 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006273 (this species only)

 Pfam domain
No Pfam domain signature was detected for gene27283.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR027240
all species →		DomainCalcium-binding protein CAB45, EF-handInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10827
all species →		RETICULOCALBINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0017156
all species →		Biological Processcalcium-ion regulated exocytosisInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19934SDF4; calcium-binding protein-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP