Detailed information of gene27313.t1 in Actinoscyphia liui

Genomic Location: chr8:21195669...21196952
NR annotation: EDO39960.1, predicted protein [Nematostella vectensis]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0009069 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02668
all species →		TauDTaurine catabolism dioxygenase TauD, TfdA familyDomainInterproscan
PF06155
all species →		GBBH-like_NGamma-butyrobetaine hydroxylase-like, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042098
all species →		Homologous_superfamilyTaurine dioxygenase TauD-like superfamilyInterproscan
IPR050411
all species →		FamilyAlpha-ketoglutarate-dependent hydroxylasesInterproscan
IPR003819
all species →		DomainTauD/TfdA-like domainInterproscan
IPR038492
all species →		Homologous_superfamilyGBBH-like, N-terminal domain superfamilyInterproscan
IPR010376
all species →		DomainGamma-butyrobetaine hydroxylase-like, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10696
all species →		GAMMA-BUTYROBETAINE HYDROXYLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0045329
all species →		Biological Processcarnitine biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene27313.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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