Detailed information of gene28058.t1 in Actinoscyphia liui

Genomic Location: chr9:7950000...7956133
NR annotation: no NCBI-NR hit recorded
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391
all species →		CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050938
all species →		FamilyCollagen and Collagen-like Structural ProteinsInterproscan
IPR008160
all species →		RepeatCollagen triple helix repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37456
all species →		SI:CH211-266K2.1Interproscan

 Gene Ontology
No Gene Ontology signature was detected for gene28058.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene28058.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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