Detailed information of gene28064.t1 in Actinoscyphia liui

Genomic Location: chr9:8036993...8074834
NR annotation: XP_020893962.1, GDP-L-fucose synthase [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P23591GDP-L-fucose synthase OS=Mus musculus OX=10090 GN=Gfus PE=1 SV=3
Q8K3X2GDP-L-fucose synthase OS=Cricetulus griseus OX=10029 GN=GFUS PE=2 SV=1
Q13630GDP-L-fucose synthase OS=Homo sapiens OX=9606 GN=GFUS PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003097 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01370
all species →		EpimeraseNAD dependent epimerase/dehydratase familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR028614
all species →		FamilyGDP-L-fucose synthase/GDP-L-colitose synthaseInterproscan
IPR001509
all species →		DomainNAD-dependent epimerase/dehydrataseInterproscan
IPR036291
all species →		Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43238
all species →		GDP-L-FUCOSE SYNTHASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0009226
all species →		Biological Processnucleotide-sugar biosynthetic processInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0050577
all species →		Molecular FunctionGDP-L-fucose synthase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K00859coaE; dephospho-CoA kinaseEC:2.7.1.24
Pantothenate and CoA biosynthesisko00770deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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